RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 GNB4Q9HAV0 340 aa9.52□□□□□ -0.89
CLSTN3-208ENST00000538933 MFSD2BA6NFX1 497 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 ZFP92A6NM28 416 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 TAAR5O14804 337 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 ARL16Q0P5N6 197 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 RAB31Q13636 194 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 FAM209BQ5JX69 171 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 PVRIGQ6DKI7 326 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 TMUB2Q71RG4 321 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 KCNRGQ8N5I3 272 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 LINC00476Q8WZB0 136 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 TXN2Q99757 166 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 NPVFQ9HCQ7 196 aa9.51□□□□□ -0.89
CLSTN3-208ENST00000538933 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 ANKRD34BA5PLL1 514 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 FNDC10F2Z333 226 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 NUPL2O15504 423 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 CXCL2P19875 107 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 FGF7P21781 194 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 GPR183P32249 361 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 KIAA0141Q14154 515 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 GAMTQ14353 236 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF709Q8N972 641 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 OR4X1Q8NH49 305 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 MYOZ3Q8TDC0 251 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 NPIPB3Q92617 1050 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 BSCL2Q96G97 398 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 UBE2E2Q96LR5 201 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF471Q9BX82 626 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
CLSTN3-208ENST00000538933 OR2T8A6NH00 312 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 BCL2L11O43521 198 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 CLN5O75503 358 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 CLEC3BP05452 202 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 FABP1P07148 127 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 OR10J1P30954 320 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 LGALSLQ3ZCW2 172 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 TEPPQ6URK8 271 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
CLSTN3-208ENST00000538933 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 I3L521 148 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 ARL3P36405 182 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 RUNX1Q01196 453 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 OPCMLQ14982 345 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 HAGHQ16775 308 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 ZNF343Q6P1L6 599 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 BTNL8Q6UX41 500 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 C9orf62Q8N4C0 152 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 OR1N2Q8NGR9 330 aa9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 PEF1Q9UBV8 284 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-208ENST00000538933 PKHD1P08F94 4074 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 TGOLN2O43493 480 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 MPDU1O75352 247 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 FCGR2BP31994 310 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 CAMLGP49069 296 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 VWC2Q2TAL6 325 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 RPL7L1Q6DKI1 246 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 SPSB3Q6PJ21 355 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 HSD17B11Q8NBQ5 300 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 IL17DQ8TAD2 202 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 ATP6V0BQ99437 205 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 MRPL36Q9P0J6 103 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
CLSTN3-208ENST00000538933 PPP5D1E7EU14 171 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 OVOL1O14753 267 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 TPT1P13693 172 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 RELQ04864 619 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 ZNF616Q08AN1 781 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 TIGITQ495A1 244 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 THAP8Q8NA92 274 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 DLX4Q92988 240 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 TRGV9Q99603 122 aa9.46□□□□□ -0.9
CLSTN3-208ENST00000538933 AGPAT2O15120 278 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 GGCTO75223 188 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 SAP30O75446 220 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 YIF1AO95070 293 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 HSPB1P04792 205 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 SELENOTP62341 195 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms