RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 AP2S1P53680 142 aaPredicted RBP10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 PPP1R1AQ13522 171 aa10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 GAMTQ14353 236 aa10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 SLC25A21Q9BQT8 299 aaPredicted RBP10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 BUB3O43684 328 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 PITX3O75364 302 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 SFT2D2O95562 160 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 HOXB5P09067 269 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 GIG44P09565 113 aaPredicted RBP10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 C4BPBP20851 252 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 ZNF90Q03938 601 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 SPANXN2Q5MJ10 180 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 CENPSQ8N2Z9 138 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 RBM38Q9H0Z9 239 aaKnown RBP10.42□□□□□ -0.74
RTN3P1-201ENST00000536295 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 FAM90A26D6RGX4 464 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 SPP1P10451 314 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 GPX4P36969 197 aaPredicted RBP10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 INPP1P49441 399 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 ATP5IP56385 69 aaPredicted RBP10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 LYZP61626 148 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 RAB11AP62491 216 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 OR2F1Q13607 317 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 MORN3Q6PF18 240 aaPredicted RBP10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 LRTM2Q8N967 370 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 SRRQ9GZT4 340 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 NRN1Q9NPD7 142 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 CLEC5AQ9NY25 188 aa10.41□□□□□ -0.74
RTN3P1-201ENST00000536295 AGRNO00468 2067 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 WRBO00258 174 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 MED6O75586 246 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 DEDD2Q8WXF8 326 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 TMED3Q9Y3Q3 217 aa10.4□□□□□ -0.74
RTN3P1-201ENST00000536295 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 LINC00854A0A1B0GVQ3 168 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 FABP1P07148 127 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 SLC25A6P12236 298 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 NUP62P37198 522 aaPredicted RBP10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 BAK1Q16611 211 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 TMEM41BQ5BJD5 291 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 TRIQKQ629K1 86 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 Q8NAQ8 132 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 PPP1R14BQ96C90 147 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
RTN3P1-201ENST00000536295 SNRPGP15A8MWD9 76 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 ZNF701M0R085 212 aaPredicted RBP10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 SYNGR2O43760 224 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 RPP30P78346 268 aaKnown RBP10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 SPANXN5Q5MJ07 72 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 GSG1LQ6UXU4 331 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 CIB3Q96Q77 187 aaPredicted RBP10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
RTN3P1-201ENST00000536295 IGKV1OR2-108A0A075B7D4 117 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 C9orf170A2RU37 121 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 H3BP45 60 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 ADAP1O75689 374 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 DEFB1P60022 68 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 LINC00052Q96N35 136 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 TRGV9Q99603 122 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 TBC1D24Q9ULP9 559 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 X6R8D5 127 aa10.37□□□□□ -0.75
RTN3P1-201ENST00000536295 NAP1L6A6NFF2 107 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 ZNF705EA8MWA4 302 aaPredicted RBP10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 H3BMM0 161 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 NDUFB6O95139 128 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 MIFP14174 115 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 UBE2MP61081 183 aaKnown RBP10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 NUTF2P61970 127 aaKnown RBP10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 THAP8Q8NA92 274 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 SEPSECSQ9HD40 501 aaKnown RBP10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
RTN3P1-201ENST00000536295 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 OR8I2Q8N0Y5 310 aa10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 COQ8AQ8NI60 647 aa10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
RTN3P1-201ENST00000536295 ELOA3CA0A087WX78 387 aaPredicted RBP10.34□□□□□ -0.75
RTN3P1-201ENST00000536295 PRSS46E5RG02 174 aa10.34□□□□□ -0.75
RTN3P1-201ENST00000536295 DEDDO75618 318 aa10.34□□□□□ -0.75
RTN3P1-201ENST00000536295 OR4E1P0C645 316 aa10.34□□□□□ -0.75
RTN3P1-201ENST00000536295 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
RTN3P1-201ENST00000536295 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms