RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 TDRG1Q3Y452 100 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 MORN5Q5VZ52 161 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 PATE2Q6UY27 113 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 C19orf35Q6ZS72 473 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF329Q86UD4 541 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 NIT1Q86X76 327 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 SIGLECL1Q8N7X8 197 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 DEFB124Q8NES8 71 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 DEFB108BQ8NET1 73 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 OR10W1Q8NGF6 305 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 VSTM2AQ8TAG5 236 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 ST6GALNAC6Q969X2 333 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM186Q96B77 213 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 HARBI1Q96MB7 349 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 VAMP8Q9BV40 100 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 SAMD10Q9BYL1 202 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 RNASE7Q9H1E1 156 aaKnown RBP4.6□□□□□ -1.67
VPS33A-203ENST00000536212 FNDC4Q9H6D8 234 aaPredicted RBP4.6□□□□□ -1.67
VPS33A-203ENST00000536212 FAM30AQ9NZY2 134 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 ZNRD1Q9P1U0 126 aa4.6□□□□□ -1.67
VPS33A-203ENST00000536212 TRAV5A0A0B4J249 113 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 C17orf100A8MU93 164 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 DIRC3C9JPN6 131 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 E7EUB6 86 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM178BH3BS89 294 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 K7ERU9 68 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 PEX7O00628 323 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 DNAJC13O75165 2243 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF324O75467 553 aaPredicted RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 APCSP02743 223 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 CHRNB4P30926 498 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 SUB1P53999 127 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 DLX6P56179 175 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 PLP1P60201 277 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 UBE2L3P68036 154 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 WT1-ASQ06250 92 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 C5orf64Q2M2E5 130 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 MRGPRG-AS1Q2M3A8 158 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 IBA57Q5T440 356 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 GDF5OSQ5U4N7 250 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 C10orf113Q5VZT2 155 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF705AQ6ZN79 300 aaPredicted RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 SSX8Q7RTT4 187 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 ZCCHC24Q8N2G6 241 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 RPRMLQ8N4K4 120 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 C11orf44Q8N8P7 122 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 STXBP6Q8NFX7 210 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 OR4C13Q8NGP0 309 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 OR2T6Q8NHC8 308 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 FAM57AQ8TBR7 257 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 VN1R17PQ8TDU5 208 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TSKUQ8WUA8 353 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TMEM190Q8WZ59 177 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 NPIPB3Q92617 1050 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 FLYWCH2Q96CP2 140 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 FXYD5Q96DB9 178 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 SNRNP40Q96DI7 357 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TRGV9Q99603 122 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 VPS25Q9BRG1 176 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 ATG101Q9BSB4 218 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 PAXXQ9BUH6 204 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 NRN1Q9NPD7 142 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF355PQ9NSJ1 428 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 CLEC5AQ9NY25 188 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 KAAG1Q9UBP8 84 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 SMPXQ9UHP9 88 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 WASHC3Q9Y3C0 194 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TBL2Q9Y4P3 447 aaKnown RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 AMMECR1Q9Y4X0 333 aaPredicted RBP4.59□□□□□ -1.67
VPS33A-203ENST00000536212 KLF12Q9Y4X4 402 aa4.59□□□□□ -1.67
VPS33A-203ENST00000536212 TET2Q6N021 2002 aaPredicted RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 A0A0C4DFX4 3053 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 TRAV34A0A0B4J273 112 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 SPAARA0A1B0GVQ0 90 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 DPRXA6NFQ7 191 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 COX7A2P2O60397 106 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 CRYGBP07316 175 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 C3orf79P0CE67 100 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 MGST1P10620 155 aaKnown RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 CCL3L1P16619 93 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 SRIP30626 198 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 CA7P43166 264 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 LGALS7P47929 136 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 AMTP48728 403 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 KRTDAPP60985 99 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 FAM27E3Q08E93 113 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 FXYD3Q14802 87 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 KIAA1644Q3SXP7 199 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 MRPL54Q6P161 138 aaKnown RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 ATP5L2Q7Z4Y8 100 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 RBMXL3Q8N7X1 1067 aaKnown RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 TEX45Q8NA69 505 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 OR10X1Q8NGY0 326 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 C18orf32Q8TCD1 76 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 RND1Q92730 232 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms