RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RPS16P62249 146 aaKnown RBP9.79□□□□□ -0.84
SCARB1-204ENST00000535005 VWC2Q2TAL6 325 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 FBLN7Q53RD9 439 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 NPBQ8NG41 125 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 CIB3Q96Q77 187 aaPredicted RBP9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM208Q9BTX3 173 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 KCNIP2Q9NS61 270 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TEP1Q99973 2627 aaKnown RBP9.78□□□□□ -0.84
SCARB1-204ENST00000535005 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
SCARB1-204ENST00000535005 IGLV2-23P01705 113 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 IGHV4-59P01825 116 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM11P17152 192 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 ELLP55199 621 aaPredicted RBP9.78□□□□□ -0.84
SCARB1-204ENST00000535005 HES1Q14469 280 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 HARBI1Q96MB7 349 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 ELOVL1Q9BW60 279 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
SCARB1-204ENST00000535005 NDUFA3O95167 84 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1-5P01602 117 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 CRYGBP07316 175 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 IL6RP08887 468 aaPredicted RBP9.77□□□□□ -0.84
SCARB1-204ENST00000535005 P0C879 139 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 IAPPP10997 89 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 G0S2P27469 103 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 PSG5Q15238 335 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 Q6ZRM9 215 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 LINC01551Q86U37 167 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 ZNF709Q8N972 641 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 CMTM2Q8TAZ6 248 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 ZNF418Q8TF45 676 aaPredicted RBP9.77□□□□□ -0.84
SCARB1-204ENST00000535005 C1RLQ9NZP8 487 aa9.77□□□□□ -0.84
SCARB1-204ENST00000535005 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 NBR2O15453 112 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
SCARB1-204ENST00000535005 NXPH3O95157 252 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 KRASP01116 189 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 ERVK-16P61578 105 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 VMA21Q3ZAQ7 101 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 ACSM6Q6P461 480 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 TEX45Q8NA69 505 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 ATG101Q9BSB4 218 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.85
SCARB1-204ENST00000535005 RRHO14718 337 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 CNTFRP26992 372 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 G6PCP35575 357 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 RPL19P84098 196 aaKnown RBP9.76□□□□□ -0.85
SCARB1-204ENST00000535005 FAM78BQ5VT40 261 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 OR4A5Q8NH83 315 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 VSTM2AQ8TAG5 236 aa9.76□□□□□ -0.85
SCARB1-204ENST00000535005 ZNF320A2RRD8 509 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 ZNF705FA8MVS1 300 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 C11orf94C9JXX5 98 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 ZNF705DP0CH99 300 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 ZNF705BP0CI00 300 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 HILS1P60008 231 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 MMDQ15546 238 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 LY6EQ16553 131 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 COX19Q49B96 90 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 FFAR4Q5NUL3 377 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 COL5A1-AS1Q5SY13 56 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 OR4A47Q6IF82 309 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 VKORC1L1Q8N0U8 176 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 Q8N9W7 124 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 OR4B1Q8NGF8 309 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 TMEM167AQ8TBQ9 72 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 SLC25A22Q9H936 323 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 LY96Q9Y6Y9 160 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 SLC25A17O43808 307 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 PAGE4O60829 102 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 MPDU1O75352 247 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 RPL29P47914 159 aaKnown RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 ZNF705AQ6ZN79 300 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-204ENST00000535005 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 MOB4Q9Y3A3 225 aa9.75□□□□□ -0.85
SCARB1-204ENST00000535005 NIPBLQ6KC79 2804 aaeCLIP9.74□□□□□ -0.85
SCARB1-204ENST00000535005 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
SCARB1-204ENST00000535005 UPK2O00526 184 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
SCARB1-204ENST00000535005 Q0VG73 95 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 MRGPRG-AS1Q2M3A8 158 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 C5orf56Q8N8D9 126 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 VAMP8Q9BV40 100 aa9.74□□□□□ -0.85
SCARB1-204ENST00000535005 NPCDR1Q9BY65 106 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms