RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 RCL1Q9Y2P8 373 aaKnown RBP3.71□□□□□ -1.82
USH1C-210ENST00000534556 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 U3KQ87 197 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 PCLOQ9Y6V0 5065 aa3.71□□□□□ -1.82
USH1C-210ENST00000534556 FAM90A26D6RGX4 464 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 C3orf84H3BNL1 204 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 SOCS3O14543 225 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
USH1C-210ENST00000534556 IFNA4P05014 189 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 IL4P05112 153 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 ZNF688P0C7X2 276 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 PRB4P10163 310 aaPredicted RBP3.7□□□□□ -1.82
USH1C-210ENST00000534556 SLC25A4P12235 298 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 ANXA3P12429 323 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 C4BPBP20851 252 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 NPPCP23582 126 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 GPX4P36969 197 aaPredicted RBP3.7□□□□□ -1.82
USH1C-210ENST00000534556 SRPXP78539 464 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 IL15RAQ13261 267 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 GDF5OSQ5U4N7 250 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 LAMTOR1Q6IAA8 161 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 ZBTB8BQ8NAP8 495 aaPredicted RBP3.7□□□□□ -1.82
USH1C-210ENST00000534556 MITD1Q8WV92 249 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 RNF183Q96D59 192 aa3.7□□□□□ -1.82
USH1C-210ENST00000534556 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 TRAV30A0A087WSZ9 112 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 A0A0J9YWU9 116 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 RPS10-NUDT3A0A1W2PQS6 291 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 C7orf66A4D0T2 115 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 OR4C46A6NHA9 309 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 SSSCA1O60232 199 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 HNRNPCP07910 306 aaKnown RBP eCLIP3.69□□□□□ -1.82
USH1C-210ENST00000534556 METTL15P1P0C7V9 234 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 RD3LP0DJH9 198 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 LYL1P12980 280 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 IAH1Q2TAA2 248 aaPredicted RBP3.69□□□□□ -1.82
USH1C-210ENST00000534556 C4orf46Q504U0 113 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 SPANXN5Q5MJ07 72 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 TMEM14EPQ6UXP3 125 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 PATE2Q6UY27 113 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 ACOT7LQ6ZUV0 252 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
USH1C-210ENST00000534556 CSNK1G2-AS1Q8NCQ2 148 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 STXBP6Q8NFX7 210 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 Q8WTZ3 238 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 RNF125Q96EQ8 232 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 SMIM8Q96KF7 97 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 C20orf173Q96LM9 149 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 METTL26Q96S19 204 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 TRGV9Q99603 122 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 C7orf50Q9BRJ6 194 aaKnown RBP3.69□□□□□ -1.82
USH1C-210ENST00000534556 GINS3Q9BRX5 216 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 NUDT15Q9NV35 164 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 RABAC1Q9UI14 185 aa3.69□□□□□ -1.82
USH1C-210ENST00000534556 PKD1P98161 4303 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 TRAV2A0A0B4J234 112 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 KIR2DL5BA0A0G2JN68 375 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 KIR2DL5BA0A0G2JPC4 375 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 ZFP92A6NM28 416 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 F6UB75 175 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 K7EPK0 472 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 DEFB4AO15263 64 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 SPRY2O43597 315 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 UPK1BO75841 260 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 SIX6O95475 246 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 SCGB1D2O95969 90 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 H2AFB2P0C5Z0 115 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 RBMY1A1P0DJD3 496 aaKnown RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 RBMY1CP0DJD4 496 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 HLA-DMBP28068 263 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 NKX2-1P43699 371 aaPredicted RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 INPP1P49441 399 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 EIF2B2P49770 351 aaKnown RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 LYZP61626 148 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 RRAS2P62070 204 aaPredicted RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 RPL11P62913 178 aaKnown RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 ASAH1Q13510 395 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 RBMY1FQ15415 496 aaKnown RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 MORN5Q5VZ52 161 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 IGFL4Q6B9Z1 124 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 OR8G2PQ6IF36 304 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 LINC00299Q6ZSB3 139 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 Q6ZWC4 215 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 KIR2DL5AQ8N109 375 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 KIR2DL5BQ8NHK3 375 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 IL17DQ8TAD2 202 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 ZNF431Q8TF32 576 aaPredicted RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 SLC35E1Q96K37 410 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 RAB40CQ96S21 281 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 CCDC32Q9BV29 185 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 PBDC1Q9BVG4 233 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 CSTL1Q9H114 145 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 SLC25A32Q9H2D1 315 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 CLEC5AQ9NY25 188 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 PSENENQ9NZ42 101 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 PTTG2Q9NZH5 202 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 GSKIPQ9P0R6 139 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 PAIP2BQ9ULR5 123 aaKnown RBP3.68□□□□□ -1.82
USH1C-210ENST00000534556 TP53TG1Q9Y2A0 90 aa3.68□□□□□ -1.82
USH1C-210ENST00000534556 X6R8D5 127 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms