RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 BUB3O43684 328 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 SFT2D2O95562 160 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 IAPPP10997 89 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 RAB11AP62491 216 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 PPP1R1AQ13522 171 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 ACTL10Q5JWF8 245 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 CENPSQ8N2Z9 138 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 PHLDA1Q8WV24 401 aaPredicted RBP12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
AP003555.3-201ENST00000534086 FAM90A26D6RGX4 464 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 MED6O75586 246 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 LY6G6CO95867 125 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 SPP1P10451 314 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 RAB40CQ96S21 281 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
AP003555.3-201ENST00000534086 DEFB4AO15263 64 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 FABP1P07148 127 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 HOXB5P09067 269 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 INPP1P49441 399 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 ZNF90Q03938 601 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 CIB3Q96Q77 187 aaPredicted RBP12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 SRRQ9GZT4 340 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 MFFQ9GZY8 342 aa12.95□□□□□ -0.34
AP003555.3-201ENST00000534086 IGKV1D-37A0A075B6S9 117 aa12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 NANOS2P60321 138 aaKnown RBP12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 RPP30P78346 268 aaKnown RBP12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 MAGT1Q9H0U3 335 aa12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
AP003555.3-201ENST00000534086 SNRPGP15A8MWD9 76 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 WRBO00258 174 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 SYNGR2O43760 224 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 UBE2MP61081 183 aaKnown RBP12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 FBXL17Q9UF56 701 aa12.93□□□□□ -0.34
AP003555.3-201ENST00000534086 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 C4BPBP20851 252 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 LYZP61626 148 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 OR2F1Q13607 317 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 BAK1Q16611 211 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 TRGV9Q99603 122 aa12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 EPPK1P58107 5090 aaKnown RBP12.92□□□□□ -0.34
AP003555.3-201ENST00000534086 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
AP003555.3-201ENST00000534086 Q8NAQ8 132 aa12.91□□□□□ -0.34
AP003555.3-201ENST00000534086 CLEC5AQ9NY25 188 aa12.91□□□□□ -0.34
AP003555.3-201ENST00000534086 LINC00854A0A1B0GVQ3 168 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 NDUFB6O95139 128 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 MIFP14174 115 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 NUTF2P61970 127 aaKnown RBP12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 SPANXN5Q5MJ07 72 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 C1orf194Q5T5A4 169 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 PPP1R14BQ96C90 147 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 FLVCR2Q9UPI3 526 aa12.9□□□□□ -0.34
AP003555.3-201ENST00000534086 IGKV1OR2-108A0A075B7D4 117 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 ZNF705EA8MWA4 302 aaPredicted RBP12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 H3BMM0 161 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 ADAP1O75689 374 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 RBMY1A1P0DJD3 496 aaKnown RBP12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 RBMY1CP0DJD4 496 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 RBMY1FQ15415 496 aaKnown RBP12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 TBC1D24Q9ULP9 559 aa12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 STRAPQ9Y3F4 350 aaKnown RBP12.89□□□□□ -0.35
AP003555.3-201ENST00000534086 CENPXA8MT69 81 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 ID1P41134 155 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 OR8I2Q8N0Y5 310 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 COQ8AQ8NI60 647 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 WDR12Q9GZL7 423 aaKnown RBP12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 X6R8D5 127 aa12.88□□□□□ -0.35
AP003555.3-201ENST00000534086 H3BP45 60 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 IFNA21P01568 189 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 OR4E1P0C645 316 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 HLA-DRB4P13762 266 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 ID3Q02535 119 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 C2CD4CQ8TF44 421 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
AP003555.3-201ENST00000534086 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms