RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
TRIM3-212ENST00000533064 SFT2D1Q8WV19 159 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 MBD3L1Q8WWY6 194 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
TRIM3-212ENST00000533064 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 CLEC3BP05452 202 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 GPR183P32249 361 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 ZNF726P1Q15940 193 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 ZNF343Q6P1L6 599 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.64
TRIM3-212ENST00000533064 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 CCDC140Q96MF4 163 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 TRGV9Q99603 122 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.64
TRIM3-212ENST00000533064 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 SELENOTP62341 195 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 PRIMA1Q86XR5 153 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 WFDC12Q8WWY7 111 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 LINC00052Q96N35 136 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 CTXND1A0A1B0GTU2 59 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 TGOLN2O43493 480 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 CD5P06127 495 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 CD28P10747 220 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 ARL3P36405 182 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 SRSF3P84103 164 aaKnown RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 CYP2G1PQ6ZSU1 146 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 OR5B12Q96R08 314 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 TREM1Q9NP99 234 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 SLC39A9Q9NUM3 307 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 PEF1Q9UBV8 284 aaKnown RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
TRIM3-212ENST00000533064 TSSC4Q9Y5U2 329 aaPredicted RBP11.01□□□□□ -0.65
TRIM3-212ENST00000533064 A0A1B0GV50 99 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 MAP1LC3B2A6NCE7 125 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 F8W735 103 aaPredicted RBP11□□□□□ -0.65
TRIM3-212ENST00000533064 YIF1AO95070 293 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 B2MP61769 119 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 CCL20P78556 96 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 PRR20EP86478 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 PRR20CP86479 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 PRR20DP86480 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 PRR20BP86481 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 PRR20AP86496 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 GUK1Q16774 197 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 TIGITQ495A1 244 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 SSX7Q7RTT5 188 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 STPG3Q8N7X2 389 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 NARS2Q96I59 477 aaKnown RBP11□□□□□ -0.65
TRIM3-212ENST00000533064 SCRT1Q9BWW7 348 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 MAP1LC3BQ9GZQ8 125 aa11□□□□□ -0.65
TRIM3-212ENST00000533064 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 SEC14L6B5MCN3 397 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 CTSGP08311 255 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 YPEL3P61236 119 aaPredicted RBP10.99□□□□□ -0.65
TRIM3-212ENST00000533064 ZNF90Q03938 601 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 RELQ04864 619 aaPredicted RBP10.99□□□□□ -0.65
TRIM3-212ENST00000533064 PEA15Q15121 130 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 KRTAP24-1Q3LI83 254 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 LCN15Q6UWW0 184 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 C4orf3Q8WVX3 66 aa10.99□□□□□ -0.65
TRIM3-212ENST00000533064 PPP5D1E7EU14 171 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 IGKV1-17P01599 117 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 AWAT1Q58HT5 328 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 FAM122CQ6P4D5 195 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 Q8WTZ3 238 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 TMEM158Q8WZ71 300 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 RAB24Q969Q5 203 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
TRIM3-212ENST00000533064 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
TRIM3-212ENST00000533064 SMDT1Q9H4I9 107 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 TMEM231Q9H6L2 316 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 SLC25A22Q9H936 323 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 GGCTO75223 188 aaKnown RBP10.98□□□□□ -0.65
TRIM3-212ENST00000533064 TOMM40O96008 361 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 LINC00869P0C866 280 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 CDC34P49427 236 aaPredicted RBP10.98□□□□□ -0.65
TRIM3-212ENST00000533064 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
TRIM3-212ENST00000533064 C19orf24Q9BVV8 132 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms