RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 STHQ8IWL8 128 aa11.53□□□□□ -0.56
LDLRAD3-205ENST00000532490 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
LDLRAD3-205ENST00000532490 C11orf68Q9H3H3 251 aaKnown RBP11.53□□□□□ -0.56
LDLRAD3-205ENST00000532490 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
LDLRAD3-205ENST00000532490 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 ZNF90Q03938 601 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 DHRS2Q13268 280 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 BAK1Q16611 211 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 LINC00476Q8WZB0 136 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 RNF125Q96EQ8 232 aa11.52□□□□□ -0.57
LDLRAD3-205ENST00000532490 IAPPP10997 89 aa11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 RAB40CQ96S21 281 aa11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 SDHCQ99643 169 aaPredicted RBP11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
LDLRAD3-205ENST00000532490 IGKV1OR2-108A0A075B7D4 117 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 PRSS46E5RG02 174 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 SPP1P10451 314 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 C4BPBP20851 252 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 UBE2MP61081 183 aaKnown RBP11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 OR8G2PQ6IF36 304 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 SLC35E1Q96K37 410 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
LDLRAD3-205ENST00000532490 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 SYNGR2O43760 224 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 MED6O75586 246 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 NDUFB6O95139 128 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 HOXB5P09067 269 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 RAB11AP62491 216 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 THAP8Q8NA92 274 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 Q8NAQ8 132 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 CSNK1G2-AS1Q8NCQ2 148 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 TRGV9Q99603 122 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 BIRC6Q9NR09 4857 aa11.49□□□□□ -0.57
LDLRAD3-205ENST00000532490 NAP1L6A6NFF2 107 aa11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 DEFB4AO15263 64 aa11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 CIB3Q96Q77 187 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD3-205ENST00000532490 WRBO00258 174 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 RBMY1A1P0DJD3 496 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 RBMY1CP0DJD4 496 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 BTCP35070 178 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 ID3Q02535 119 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 RBMY1FQ15415 496 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 X6R8D5 127 aa11.47□□□□□ -0.57
LDLRAD3-205ENST00000532490 SNRPGP15A8MWD9 76 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 H3BMM0 161 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 ADAP1O75689 374 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 LY6G6CO95867 125 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 OR2F1Q13607 317 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 C1orf194Q5T5A4 169 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 TRIQKQ629K1 86 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 WDR12Q9GZL7 423 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 MFFQ9GZY8 342 aa11.46□□□□□ -0.57
LDLRAD3-205ENST00000532490 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 SOCS3O14543 225 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 FABP1P07148 127 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 OR4E1P0C645 316 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 LYZP61626 148 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 VPS13DQ5THJ4 4388 aa11.45□□□□□ -0.58
LDLRAD3-205ENST00000532490 MIFP14174 115 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 INPP1P49441 399 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 SPANXN5Q5MJ07 72 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 TMEM182Q6ZP80 229 aaPredicted RBP11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 OR4D5Q8NGN0 318 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
LDLRAD3-205ENST00000532490 LINC00854A0A1B0GVQ3 168 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 H3BP45 60 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 IL7P13232 177 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 DEFB1P60022 68 aa11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
LDLRAD3-205ENST00000532490 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms