RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LILRB2Q8N423 598 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 SCGB1C1Q8TD33 95 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 PHYHIPLQ96FC7 376 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 PAIP2BQ9ULR5 123 aaKnown RBP10.99□□□□□ -0.65
CPSF1-206ENST00000531480 FNDC10F2Z333 226 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 RAB14P61106 215 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 YPEL3P61236 119 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-206ENST00000531480 EWSR1Q01844 656 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF1-206ENST00000531480 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 ZNF767PQ75MW2 155 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-206ENST00000531480 ZFAND3Q9H8U3 227 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
CPSF1-206ENST00000531480 SORL1Q92673 2214 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 IGKV1D-37A0A075B6S9 117 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 IGHV3-35A0A0C4DH35 117 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 SAP30O75446 220 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 CXCL2P19875 107 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 OR10J1P30954 320 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 HAPLN4Q86UW8 402 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 THAP8Q8NA92 274 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 MARC2Q969Z3 335 aa10.97□□□□□ -0.65
CPSF1-206ENST00000531480 GNPNAT1Q96EK6 184 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-206ENST00000531480 DAZ1Q9NQZ3 744 aaKnown RBP10.97□□□□□ -0.65
CPSF1-206ENST00000531480 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
CPSF1-206ENST00000531480 IGKV1OR2-108A0A075B7D4 117 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 FAM24AA6NFZ4 105 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 FOLR2P14207 255 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 CBLN1P23435 193 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 DLK1P80370 383 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 TM4SF20Q53R12 229 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 TOMM20LQ6UXN7 152 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 SLC35E1Q96K37 410 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 KCNIP2Q9NS61 270 aa10.96□□□□□ -0.65
CPSF1-206ENST00000531480 MRPL27Q9P0M9 148 aaKnown RBP10.96□□□□□ -0.65
CPSF1-206ENST00000531480 ZMAT5Q9UDW3 170 aaKnown RBP10.96□□□□□ -0.65
CPSF1-206ENST00000531480 ZNF320A2RRD8 509 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 MPDU1O75352 247 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 METTL15P1P0C7V9 234 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 EDN2P20800 178 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 TIGITQ495A1 244 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 LAMTOR1Q6IAA8 161 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 TMEM144Q7Z5S9 345 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 BAP18Q8IXM2 172 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 ZNF709Q8N972 641 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 OR5C1Q8NGR4 320 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 TRGV9Q99603 122 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 ATP5SQ99766 215 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 UQCC1Q9NVA1 299 aa10.95□□□□□ -0.66
CPSF1-206ENST00000531480 TECRQ9NZ01 308 aaKnown RBP10.95□□□□□ -0.66
CPSF1-206ENST00000531480 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
CPSF1-206ENST00000531480 C17orf112F2Z3M2 114 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 CST7O76096 145 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 TOMM40O96008 361 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 SLC38A11Q08AI6 406 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 TMEM147Q9BVK8 224 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-206ENST00000531480 FBXL17Q9UF56 701 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 UBQLN2Q9UHD9 624 aa10.94□□□□□ -0.66
CPSF1-206ENST00000531480 IGSF23A1L1A6 192 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 RAB5CP51148 216 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 NHLH2Q02577 135 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 VWC2Q2TAL6 325 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 OR8G2PQ6IF36 304 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 TEX261Q6UWH6 196 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 MLXQ9UH92 298 aa10.93□□□□□ -0.66
CPSF1-206ENST00000531480 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
CPSF1-206ENST00000531480 IGHV7-4-1A0A0J9YVY3 117 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 FABP1P07148 127 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 CRYBB3P26998 211 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 Q8WTZ3 238 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 GINS3Q9BRX5 216 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 C20orf24Q9BUV8 137 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 VSIRQ9H7M9 311 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 NPVFQ9HCQ7 196 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 SMPXQ9UHP9 88 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 U3KQE9 123 aa10.92□□□□□ -0.66
CPSF1-206ENST00000531480 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 ZFP92A6NM28 416 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 UMAD1C9J7I0 102 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 YIF1AO95070 293 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 MBP02144 154 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 SEC11BP0C7V7 166 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 PSG1P11464 419 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 ZNF90Q03938 601 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms