RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 IGHV3OR16-8A0A075B7F1 116 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 C2orf70A6NJV1 201 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 SEC14L6B5MCN3 397 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 AGPAT2O15120 278 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 BTNL8Q6UX41 500 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 MARC2Q969Z3 335 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 MGST2Q99735 147 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 NEURL2Q9BR09 285 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 SMIM3Q9BZL3 60 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
SF3B2-211ENST00000531041 C1QBP02746 253 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 IL4P05112 153 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 C8orf88P0DMB2 117 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 IGLL1P15814 213 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 CBLN1P23435 193 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 CAMLGP49069 296 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 INSL3P51460 131 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 OR2F1Q13607 317 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 ZNF345Q14585 488 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 C9orf66Q5T8R8 295 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 TMEM182Q6ZP80 229 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-211ENST00000531041 BPIFCQ8NFQ6 507 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
SF3B2-211ENST00000531041 MFFQ9GZY8 342 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 WFDC1Q9HC57 220 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
SF3B2-211ENST00000531041 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
SF3B2-211ENST00000531041 FOLR2P14207 255 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 FGF7P21781 194 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-211ENST00000531041 AP2S1P53680 142 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-211ENST00000531041 CD300CQ08708 224 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 PARD6GQ9BYG4 376 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-211ENST00000531041 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
SF3B2-211ENST00000531041 WIPF1O43516 503 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
SF3B2-211ENST00000531041 SAP30O75446 220 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 IFNA5P01569 189 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 EDN2P20800 178 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 CRYBB3P26998 211 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 ZNF266Q14584 549 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 USF2Q15853 346 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-211ENST00000531041 METTL26Q96S19 204 aa12.85□□□□□ -0.35
SF3B2-211ENST00000531041 NPPCP23582 126 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
SF3B2-211ENST00000531041 PLP1P60201 277 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 OPCMLQ14982 345 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 HYLS1Q96M11 299 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
SF3B2-211ENST00000531041 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 DNHD1Q96M86 4753 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 A0A0D9SG52 128 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 IGHV7-4-1A0A0J9YVY3 117 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 TAAR5O14804 337 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 LINC00869P0C866 280 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 LYZP61626 148 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PRR20EP86478 221 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PRR20CP86479 221 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PRR20DP86480 221 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PRR20BP86481 221 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PRR20AP86496 221 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 OXLD1Q5BKU9 147 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 U3KQE9 123 aa12.83□□□□□ -0.36
SF3B2-211ENST00000531041 IGLV1-51P01701 117 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 HNRNPCP07910 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
SF3B2-211ENST00000531041 CXCL2P19875 107 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 ZNF709Q8N972 641 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
SF3B2-211ENST00000531041 TECRQ9NZ01 308 aaKnown RBP12.82□□□□□ -0.36
SF3B2-211ENST00000531041 SORL1Q92673 2214 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 A0A1W2PS18 150 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 CHEK1O14757 476 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-211ENST00000531041 ORM2P19652 201 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 BMI1P35226 326 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 EIF2B2P49770 351 aaKnown RBP12.81□□□□□ -0.36
SF3B2-211ENST00000531041 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 RHPN1-AS1Q9BWJ2 59 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 MLXQ9UH92 298 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 PXMP4Q9Y6I8 212 aa12.81□□□□□ -0.36
SF3B2-211ENST00000531041 MGAM2Q2M2H8 2515 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms