RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 CTXN2P0C2S0 81 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 TCN2P20062 427 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 OMGP23515 440 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 APLNRP35414 380 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 SRP14P37108 136 aaKnown RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 CEACAM3P40198 252 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 TDGF1P3P51864 188 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 RPL23P62829 140 aaKnown RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 RPL31P62899 125 aaKnown RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 CCL7P80098 99 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 IQCJQ1A5X6 159 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 TMEM241Q24JQ0 296 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 TMEM249Q2WGJ8 235 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 BSXQ3C1V8 233 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 ACOT6Q3I5F7 207 aaPredicted RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 FAM27BQ5VT28 67 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 ZNF880Q6PDB4 577 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 WDR82Q6UXN9 313 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 C16orf47Q6ZP98 133 aaPredicted RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 C20orf196Q8IYI0 205 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 SAXO1Q8IYX7 474 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 GAPTQ8N292 157 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 ZIC4Q8N9L1 334 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 OR10G3Q8NGC4 313 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 SCGB1C1Q8TD33 95 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 ARPC1AQ92747 370 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 LSM10Q969L4 123 aaKnown RBP3.07□□□□□ -1.92
USP47-209ENST00000530041 BORCS8Q96FH0 119 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 VSIG2Q96IQ7 327 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 BTF3L4Q96K17 158 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 C20orf144Q9BQM9 153 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 GNG13Q9P2W3 67 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 NAGKQ9UJ70 344 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 ST3GAL6Q9Y274 331 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 RP1P56715 2156 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 SHANK1Q9Y566 2161 aa3.07□□□□□ -1.92
USP47-209ENST00000530041 IGHV1OR15-1A0A075B7D0 117 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 IGHV3OR16-13A0A075B7E8 117 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 IGKV1D-13A0A0B4J2D9 117 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 IGKV1-6A0A0C4DH72 117 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 KIR2DS1A0A191URI9 304 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 MAP1LC3B2A6NCE7 125 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 CEBPZOSA8MTT3 80 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 C12orf77C9JDV5 145 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 TOX3O15405 576 aaPredicted RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 DLEU1O43261 78 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 YPEL1O60688 119 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 ZNF737O75373 536 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 OR2J2O76002 312 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 OR4A8P0C604 315 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 LINC00614P0C842 121 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 IGKV1-13P0DP09 117 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 ESDP10768 282 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 CD99P14209 185 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 MDKP21741 143 aaPredicted RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 F2RP25116 425 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 GUCA1AP43080 201 aaPredicted RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 VDAC2P45880 294 aaPredicted RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 GALR1P47211 349 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 CEBPGP53567 150 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 APOC4P55056 127 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 KIR2DS1Q14954 304 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 HERPUD1Q15011 391 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 SHHQ15465 462 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 PIGYQ3MUY2 71 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 LCN15Q6UWW0 184 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 TMEM14EPQ6UXP3 125 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 TEX43Q6ZNM6 134 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 ZNF818PQ6ZRF7 136 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 SSX7Q7RTT5 188 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 TMEM144Q7Z5S9 345 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 PRSS58Q8IYP2 241 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 ZNF738Q8NE65 137 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 OR2Y1Q8NGV0 311 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 OR2T10Q8NGZ9 312 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 LMX1AQ8TE12 382 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 FAM122AQ96E09 287 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 YPEL2Q96QA6 119 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 OR4C12Q96R67 309 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 SMIM7Q9BQ49 75 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 RSG1Q9BU20 258 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 MAP1LC3BQ9GZQ8 125 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 WDR61Q9GZS3 305 aaKnown RBP3.06□□□□□ -1.92
USP47-209ENST00000530041 OR51I2Q9H344 312 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 VSIRQ9H7M9 311 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 WDR54Q9H977 334 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 CCL28Q9NRJ3 127 aa3.06□□□□□ -1.92
USP47-209ENST00000530041 PCDH15Q96QU1 1955 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 GOLGB1Q14789 3259 aaKnown RBP3.05□□□□□ -1.92
USP47-209ENST00000530041 TRAV9-1A0A075B6T8 112 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 IGHV1OR15-9A0A0B4J2B8 117 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 CTXND1A0A1B0GTU2 59 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 ZFP92A6NM28 416 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
USP47-209ENST00000530041 ZNF705GA8MUZ8 300 aaPredicted RBP3.05□□□□□ -1.92
USP47-209ENST00000530041 TP53I11O14683 189 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 SYNGR2O43760 224 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 TNFSF13O75888 250 aa3.05□□□□□ -1.92
USP47-209ENST00000530041 HPRT1P00492 218 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms