RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 IL4P05112 153 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 VWC2Q2TAL6 325 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 TMEM182Q6ZP80 229 aaPredicted RBP10.61□□□□□ -0.71
USF1-209ENST00000529476 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 GINS3Q9BRX5 216 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 TMEM147Q9BVK8 224 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 UQCC1Q9NVA1 299 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
USF1-209ENST00000529476 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
USF1-209ENST00000529476 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 UBE2L5PA0A1B0GUS4 154 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 A0A1B0GVG6 124 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 IGLV1-51P01701 117 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 FABP1P07148 127 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 GATA2P23769 480 aaPredicted RBP10.6□□□□□ -0.71
USF1-209ENST00000529476 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 CLINT1Q14677 625 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 USF2Q15853 346 aaPredicted RBP10.6□□□□□ -0.71
USF1-209ENST00000529476 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 TEPPQ6URK8 271 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 CYP2G1PQ6ZSU1 146 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 OR51G1Q8NGK1 321 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 DYNLRB2Q8TF09 96 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 MLXQ9UH92 298 aa10.6□□□□□ -0.71
USF1-209ENST00000529476 LSM4Q9Y4Z0 139 aaKnown RBP10.6□□□□□ -0.71
USF1-209ENST00000529476 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 WI2-2373I1.2A0A1W2PRP0 233 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
USF1-209ENST00000529476 EGFEM1PQ0D2K5 195 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 DEFB114Q30KQ6 69 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
USF1-209ENST00000529476 BTNL8Q6UX41 500 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 METTL26Q96S19 204 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 MGST2Q99735 147 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 PBDC1Q9BVG4 233 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
USF1-209ENST00000529476 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 CHEK1O14757 476 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 AGPAT2O15120 278 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 NPPCP23582 126 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 LYZP61626 148 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
USF1-209ENST00000529476 ZNF546Q86UE3 836 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 BPIFCQ8NFQ6 507 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 AQP10Q96PS8 301 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 RHPN1-AS1Q9BWJ2 59 aa10.58□□□□□ -0.72
USF1-209ENST00000529476 TECRQ9NZ01 308 aaKnown RBP10.58□□□□□ -0.72
USF1-209ENST00000529476 FGF7P21781 194 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 CRYBB3P26998 211 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
USF1-209ENST00000529476 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 ATP5SQ99766 215 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 WFDC1Q9HC57 220 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 SLC45A2Q9UMX9 530 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 TNFSF18Q9UNG2 199 aa10.57□□□□□ -0.72
USF1-209ENST00000529476 RNF222A6NCQ9 220 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 CFDP00746 253 aaPredicted RBP10.56□□□□□ -0.72
USF1-209ENST00000529476 PRB2P02812 416 aaPredicted RBP10.56□□□□□ -0.72
USF1-209ENST00000529476 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
USF1-209ENST00000529476 LINC00869P0C866 280 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 CAMLGP49069 296 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 SELENOTP62341 195 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 INO80EQ8NBZ0 244 aaPredicted RBP10.56□□□□□ -0.72
USF1-209ENST00000529476 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 RNF2Q99496 336 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 GGTLC1Q9BX51 225 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 DOK5Q9P104 306 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 FBXL17Q9UF56 701 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 U3KQE9 123 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 SORL1Q92673 2214 aa10.56□□□□□ -0.72
USF1-209ENST00000529476 ARPC5O15511 151 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 DFFBO76075 338 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 ORM2P19652 201 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
USF1-209ENST00000529476 AP2S1P53680 142 aaPredicted RBP10.55□□□□□ -0.72
USF1-209ENST00000529476 RAB31Q13636 194 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 LCN12Q6JVE5 192 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 OR11H4Q8NGC9 324 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 OR1B1Q8NGR6 318 aa10.55□□□□□ -0.72
USF1-209ENST00000529476 WDR61Q9GZS3 305 aaKnown RBP10.55□□□□□ -0.72
USF1-209ENST00000529476 ZNF256Q9Y2P7 627 aaPredicted RBP10.55□□□□□ -0.72
USF1-209ENST00000529476 A0A1W2PS18 150 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 MPDU1O75352 247 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms