RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DTD1Q8TEA8 209 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 ASB13Q8WXK3 278 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 CIB3Q96Q77 187 aaPredicted RBP7.13□□□□□ -1.27
CHD7-208ENST00000528280 OVOL2Q9BRP0 275 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 UBQLN2Q9UHD9 624 aa7.13□□□□□ -1.27
CHD7-208ENST00000528280 IGHV3-49A0A0A0MS15 119 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 HELTA6NFD8 242 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 MPTX1A8MV57 137 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 IGKV1-17P01599 117 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 IL5P05113 134 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 H2AFB2P0C5Z0 115 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 RD3LP0DJH9 198 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 ATF4P18848 351 aaPredicted RBP7.12□□□□□ -1.27
CHD7-208ENST00000528280 VAMP1P23763 118 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 NUP62P37198 522 aaPredicted RBP7.12□□□□□ -1.27
CHD7-208ENST00000528280 TFPI2P48307 235 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 RND2P52198 227 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 ODF3L2Q3SX64 289 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 ZNF767PQ75MW2 155 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 GBGT1Q8N5D6 347 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 ST8SIA2Q92186 375 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 RNF183Q96D59 192 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 MS4A6AQ9H2W1 248 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 RBKSQ9H477 322 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 NUDT15Q9NV35 164 aa7.12□□□□□ -1.27
CHD7-208ENST00000528280 IGKV3-7A0A075B6H7 116 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 IGHV3OR16-13A0A075B7E8 117 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 IGHV3-74A0A0B4J1X5 117 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 SNRPGP15A8MWD9 76 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 SFT2D2O95562 160 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 CFDP00746 253 aaPredicted RBP7.11□□□□□ -1.27
CHD7-208ENST00000528280 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 C4BPBP20851 252 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 S100A7P31151 101 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 TIGITQ495A1 244 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 TMEM41BQ5BJD5 291 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 ZFAND6Q6FIF0 208 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 GATAD1Q8WUU5 269 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 NPIPB3Q92617 1050 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 ZNF414Q96IQ9 312 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
CHD7-208ENST00000528280 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
CHD7-208ENST00000528280 RETNQ9HD89 108 aa7.11□□□□□ -1.27
CHD7-208ENST00000528280 PITX3O75364 302 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 TOMM40O96008 361 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 IFNA21P01568 189 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 APOHP02749 345 aaPredicted RBP7.1□□□□□ -1.27
CHD7-208ENST00000528280 RPL35AP18077 110 aaKnown RBP7.1□□□□□ -1.27
CHD7-208ENST00000528280 P2RY1P47900 373 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 NKX2-5P52952 324 aaPredicted RBP7.1□□□□□ -1.27
CHD7-208ENST00000528280 APRG1Q8IVJ8 170 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 OR51G1Q8NGK1 321 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 COQ8AQ8NI60 647 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 ACY3Q96HD9 319 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 SLC35E1Q96K37 410 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 C20orf85Q9H1P6 137 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 PRR13Q9NZ81 148 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
CHD7-208ENST00000528280 RABAC1Q9UI14 185 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 U3KQE9 123 aa7.1□□□□□ -1.27
CHD7-208ENST00000528280 IGHV3-66A0A0C4DH42 116 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 ZFP92A6NM28 416 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 SYNGR2O43760 224 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 JTBO76095 146 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 NDUFB6O95139 128 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 NXPH3O95157 252 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 IL4P05112 153 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 FCN2Q15485 313 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 MORN3Q6PF18 240 aaPredicted RBP7.09□□□□□ -1.27
CHD7-208ENST00000528280 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 STHQ8IWL8 128 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 LILRB2Q8N423 598 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 STXBP6Q8NFX7 210 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 TMEM170AQ8WVE7 144 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 FBXL17Q9UF56 701 aa7.09□□□□□ -1.27
CHD7-208ENST00000528280 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 C9orf170A2RU37 121 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 K7EQG2 157 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 BUB3O43684 328 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 HOXB5P09067 269 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 GIPP09681 153 aaPredicted RBP7.08□□□□□ -1.28
CHD7-208ENST00000528280 PSG1P11464 419 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 DEFB131AP59861 70 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 SNRPD3P62318 126 aaKnown RBP7.08□□□□□ -1.28
CHD7-208ENST00000528280 DHRS2Q13268 280 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 PPP1R1AQ13522 171 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 GAMTQ14353 236 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 DEFB135Q30KP9 77 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 C1orf194Q5T5A4 169 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 GGNBP1Q5YKI7 109 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 OR8G2PQ6IF36 304 aa7.08□□□□□ -1.28
CHD7-208ENST00000528280 WRBO00258 174 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 SSNA1O43805 119 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 OR4E1P0C645 316 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 SPP1P10451 314 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 RAP2BP61225 183 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 NUTF2P61970 127 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms