RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
CAPN1-214ENST00000528165 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 C5orf17Q8NAS9 161 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 C1orf162Q8NEQ5 155 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-214ENST00000528165 OR1B1Q8NGR6 318 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 ITLN1Q8WWA0 313 aa11.82□□□□□ -0.52
CAPN1-214ENST00000528165 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 UQCRFS1P47985 274 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 SUB1P53999 127 aaKnown RBP eCLIP11.81□□□□□ -0.526e-7■□□□□ 8.8
CAPN1-214ENST00000528165 DUX4L9Q6RFH8 374 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-214ENST00000528165 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
CAPN1-214ENST00000528165 KNTC1P50748 2209 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 COL8A1P27658 744 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 HES3Q5TGS1 186 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
CAPN1-214ENST00000528165 E7EUB6 86 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 IGLV1-44P01699 117 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 ACP1P24666 158 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 THAP8Q8NA92 274 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-214ENST00000528165 A6NDN8 102 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 HAX1O00165 279 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 SPRY3O43610 288 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 LHBP01229 141 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-214ENST00000528165 TCRAP04437 139 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 WT1-ASQ06250 92 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 FOXE3Q13461 319 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
CAPN1-214ENST00000528165 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
CAPN1-214ENST00000528165 INS-IGF2F8WCM5 200 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 CSN1S1P47710 185 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 ZNF747Q9BV97 191 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
CAPN1-214ENST00000528165 C9orf118A6NHY6 69 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 KIR2DL2P43627 348 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-214ENST00000528165 DEFB108BQ8NET1 73 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
CAPN1-214ENST00000528165 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
CAPN1-214ENST00000528165 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 FA2HQ7L5A8 372 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 TMEM178AQ8NBL3 297 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 FER1L6-AS2Q96M78 137 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 Q9H3A6 140 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 DSCAMO60469 2012 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 H3BRM9 83 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 H3BTX0 84 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 PAX2Q02962 417 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 OR10AG1Q8NH19 301 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
CAPN1-214ENST00000528165 NPIPB6E9PJ23 425 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 H3BUT2 72 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
CAPN1-214ENST00000528165 PRSS3P2Q8NHM4 247 aa11.78□□□□□ -0.52
CAPN1-214ENST00000528165 TANC2Q9HCD6 1990 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 G3V4G9 280 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 NCR2O95944 276 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 FAM87AP0C7U9 286 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 PEAR1Q5VY43 1037 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-214ENST00000528165 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-214ENST00000528165 OR5AN1Q8NGI8 311 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 CCL13Q99616 98 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
CAPN1-214ENST00000528165 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 K7EP34 96 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 TM4SF5O14894 197 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 Q86TA4 180 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 VSTM2AQ8TAG5 236 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 JMJD8Q96S16 334 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 C9orf106Q8NAJ2 232 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 FAM222BQ8WU58 562 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 DPF1Q92782 380 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
CAPN1-214ENST00000528165 NAV3Q8IVL0 2385 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 CGB1A6NKQ9 187 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 M0R296 226 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 FGF6P10767 208 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 GP9P14770 177 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 NHLH1Q02575 133 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 RIGQ13278 110 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
CAPN1-214ENST00000528165 OR2K2Q8NGT1 345 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms