RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ZNF785A8K8V0 405 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 CRYBB3P26998 211 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 RELQ04864 619 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-205ENST00000527046 BAXQ07812 192 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 OR2F1Q13607 317 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 ATP6V1FQ16864 119 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 FAM90A2PQ658T7 463 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 OR51G1Q8NGK1 321 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 THAP6Q8TBB0 222 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 Q8WTZ3 238 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 C17orf77Q96MU5 243 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 AQP10Q96PS8 301 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 MCRIP2Q9BUT9 160 aaKnown RBP8.12□□□□□ -1.11
NEDD8-205ENST00000527046 C20orf24Q9BUV8 137 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 SLC25A31Q9H0C2 315 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 VSIRQ9H7M9 311 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
NEDD8-205ENST00000527046 MRPL27Q9P0M9 148 aaKnown RBP8.12□□□□□ -1.11
NEDD8-205ENST00000527046 PEMTQ9UBM1 199 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 CMYA5Q8N3K9 4069 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 CHEK1O14757 476 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 AGPAT2O15120 278 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 SAP30O75446 220 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 YIF1AO95070 293 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 INSL3P51460 131 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PLP1P60201 277 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PRR20EP86478 221 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PRR20CP86479 221 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PRR20DP86480 221 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PRR20BP86481 221 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 PRR20AP86496 221 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 AKR1C1Q04828 323 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 FGL1Q08830 312 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 CD300EQ496F6 205 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-205ENST00000527046 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 NEURL2Q9BR09 285 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
NEDD8-205ENST00000527046 IGHV3OR16-13A0A075B7E8 117 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 IGHV3-74A0A0B4J1X5 117 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 SMCO3A2RU48 225 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 BUB3O43684 328 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 IL4P05112 153 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 PET100P0DJ07 73 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 CLINT1Q14677 625 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 BTNL8Q6UX41 500 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 ZNF546Q86UE3 836 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 STX12Q86Y82 276 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 TCTE3Q8IZS6 198 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 ST8SIA2Q92186 375 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 MARC2Q969Z3 335 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 RNF125Q96EQ8 232 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 RNF2Q99496 336 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 ELOVL1Q9BW60 279 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 GGTLC1Q9BX51 225 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
NEDD8-205ENST00000527046 CYTL1Q9NRR1 136 aa8.1□□□□□ -1.11
NEDD8-205ENST00000527046 IGHV3-66A0A0C4DH42 116 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 CXCL2P19875 107 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 HBG1P69891 147 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 HBG2P69892 147 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 OPCMLQ14982 345 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 MIC13Q5XKP0 118 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 TMEM61Q8N0U2 210 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 BPIFCQ8NFQ6 507 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 GLMPQ8WWB7 406 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 TMEM37Q8WXS4 190 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
NEDD8-205ENST00000527046 FXYD6-FXYD2A0A087WZ82 144 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 HMSDA8MTL9 139 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 DFFBO76075 338 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 PRB2P02812 416 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-205ENST00000527046 NPPCP23582 126 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 RPL29P47914 159 aaKnown RBP8.08□□□□□ -1.12
NEDD8-205ENST00000527046 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 C16orf54Q6UWD8 224 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 Q8N1Y9 231 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 ATP5SQ99766 215 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-205ENST00000527046 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 TECRQ9NZ01 308 aaKnown RBP8.08□□□□□ -1.12
NEDD8-205ENST00000527046 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-205ENST00000527046 SMAD5-AS1Q9Y6J3 95 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 SORL1Q92673 2214 aa8.08□□□□□ -1.12
NEDD8-205ENST00000527046 MRPS12O15235 138 aaKnown RBP8.07□□□□□ -1.12
NEDD8-205ENST00000527046 ARPC5O15511 151 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■□□□□ 8.9
NEDD8-205ENST00000527046 FGF7P21781 194 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 CAMLGP49069 296 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 LYZP61626 148 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 391.5 ms