RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 RNASE12Q5GAN4 147 aaKnown RBP11.52□□□□□ -0.57
PTPRU-210ENST00000527027 ARRDC1Q8N5I2 433 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 OR1S2Q8NGQ3 325 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
PTPRU-210ENST00000527027 FAM210BQ96KR6 192 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 ANKRD20A5PA0PJZ0 165 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 NAP1L6A6NFF2 107 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 DISC1C4P0D8 188 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 CD74P04233 296 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 HTR2BP41595 481 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 SP6Q3SY56 376 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 STEAP1BQ6NZ63 245 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 ZNF705AQ6ZN79 300 aaPredicted RBP11.51□□□□□ -0.57
PTPRU-210ENST00000527027 Q6ZR54 194 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 NRN1Q9NPD7 142 aa11.51□□□□□ -0.57
PTPRU-210ENST00000527027 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 SMIM9A6NGZ8 99 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 ZNF705FA8MVS1 300 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-210ENST00000527027 RAB3DO95716 219 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 ZNF705DP0CH99 300 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-210ENST00000527027 ZNF705BP0CI00 300 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-210ENST00000527027 SLC25A4P12235 298 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 IL7P13232 177 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 OR10J1P30954 320 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 RND2P52198 227 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 SPCS3P61009 180 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-210ENST00000527027 Q6ZRM9 215 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 UBE2DNLQ8IWF7 75 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 TRIM63Q969Q1 353 aa11.5□□□□□ -0.57
PTPRU-210ENST00000527027 BUB3O43684 328 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 IL4P05112 153 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 UCP1P25874 307 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 EMP1P54849 157 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 DEFA1P59665 94 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 DEFA3P59666 94 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 AARDQ4LEZ3 155 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 RNASE11Q8TAA1 199 aaKnown RBP11.49□□□□□ -0.57
PTPRU-210ENST00000527027 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
PTPRU-210ENST00000527027 SCGB3A2Q96PL1 93 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 PRRT1Q99946 306 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
PTPRU-210ENST00000527027 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
PTPRU-210ENST00000527027 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
PTPRU-210ENST00000527027 UPK1BO75841 260 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 CD3DP04234 171 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 NKX2-1P43699 371 aaPredicted RBP11.48□□□□□ -0.57
PTPRU-210ENST00000527027 BAK1Q16611 211 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 RNF212Q495C1 297 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 FAM219AQ8IW50 185 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 CCDC71LQ8N9Z2 235 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 ZFAND1Q8TCF1 268 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
PTPRU-210ENST00000527027 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
PTPRU-210ENST00000527027 B3GALNT1O75752 331 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 KLF9Q13886 244 aaPredicted RBP11.47□□□□□ -0.57
PTPRU-210ENST00000527027 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 MZT2BQ6NZ67 158 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 RFNGQ9Y644 331 aa11.47□□□□□ -0.57
PTPRU-210ENST00000527027 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 CDS2O95674 445 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 TOMM40O96008 361 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 IGKV3-20P01619 116 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 NIPSNAP3BQ9BS92 247 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 MCUBQ9NWR8 336 aa11.46□□□□□ -0.57
PTPRU-210ENST00000527027 NXPH3O95157 252 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 FXYD7P58549 80 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 SURF2Q15527 256 aaPredicted RBP11.45□□□□□ -0.58
PTPRU-210ENST00000527027 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 OR4C16Q8NGL9 310 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 OR13C8Q8NGS7 320 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 HSPG2P98160 4391 aa11.45□□□□□ -0.58
PTPRU-210ENST00000527027 CEBPZOSA8MTT3 80 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 PSG1P11464 419 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 DEFB1P60022 68 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 OXA1LQ15070 435 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms