RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MEF2DQ14814 521 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 ETFRF1Q6IPR1 90 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 SELENOHQ8IZQ5 122 aaKnown RBP17.09■□□□□ 0.33
USP47-205ENST00000525257 TMEM229BQ8NBD8 167 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 OR51G1Q8NGK1 321 aa17.09■□□□□ 0.33
USP47-205ENST00000525257 C14orf166Q9Y224 244 aaKnown RBP17.09■□□□□ 0.33
USP47-205ENST00000525257 TEX13DA0A0J9YY54 714 aaPredicted RBP17.08■□□□□ 0.32
USP47-205ENST00000525257 TNFAIP8O95379 198 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 PSG1P11464 419 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 TAS2R19P59542 299 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 ABHD1Q96SE0 405 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 NAA60Q9H7X0 242 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 RFNGQ9Y644 331 aa17.08■□□□□ 0.32
USP47-205ENST00000525257 SMIM9A6NGZ8 99 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 TMEM268Q5VZI3 342 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 FAAP20Q6NZ36 180 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 STEAP1BQ6NZ63 245 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 LINC00052Q96N35 136 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 RTBDNQ9BSG5 229 aaPredicted RBP17.07■□□□□ 0.32
USP47-205ENST00000525257 PBDC1Q9BVG4 233 aa17.07■□□□□ 0.32
USP47-205ENST00000525257 FAM222AQ5U5X8 452 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 Q6ZR54 194 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 RNF125Q96EQ8 232 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 FAM210BQ96KR6 192 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 WDR12Q9GZL7 423 aaKnown RBP17.06■□□□□ 0.32
USP47-205ENST00000525257 SAV1Q9H4B6 383 aaPredicted RBP17.06■□□□□ 0.32
USP47-205ENST00000525257 PLA2G2EQ9NZK7 142 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 DKK2Q9UBU2 259 aa17.06■□□□□ 0.32
USP47-205ENST00000525257 HTN3P15516 51 aa17.05■□□□□ 0.32
USP47-205ENST00000525257 ZNF575Q86XF7 245 aa17.05■□□□□ 0.32
USP47-205ENST00000525257 AP3S1Q92572 193 aa17.05■□□□□ 0.32
USP47-205ENST00000525257 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
USP47-205ENST00000525257 NMSQ5H8A3 153 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 GSG1LQ6UXU4 331 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 FOXI2Q6ZQN5 318 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 NOXA1Q86UR1 476 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 ZNF709Q8N972 641 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 OR4B1Q8NGF8 309 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 SLC35B3Q9H1N7 401 aa17.04■□□□□ 0.32
USP47-205ENST00000525257 TEX48A0A1B0GUV7 120 aa17.03■□□□□ 0.32
USP47-205ENST00000525257 NUP62P37198 522 aaPredicted RBP17.03■□□□□ 0.32
USP47-205ENST00000525257 GPR107Q5VW38 600 aa17.03■□□□□ 0.32
USP47-205ENST00000525257 COQ8AQ8NI60 647 aa17.03■□□□□ 0.32
USP47-205ENST00000525257 HSPG2P98160 4391 aa17.02■□□□□ 0.32
USP47-205ENST00000525257 CRYM-AS1A6NIL9 109 aa17.02■□□□□ 0.32
USP47-205ENST00000525257 ID1P41134 155 aa17.02■□□□□ 0.32
USP47-205ENST00000525257 SOHLH1Q5JUK2 328 aa17.02■□□□□ 0.32
USP47-205ENST00000525257 NACAE9PAV3 2078 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 SULT1A3P0DMM9 295 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 SULT1A4P0DMN0 295 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 ZNF182P17025 639 aaPredicted RBP17.01■□□□□ 0.31
USP47-205ENST00000525257 PSMB3P49720 205 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 KLF9Q13886 244 aaPredicted RBP17.01■□□□□ 0.31
USP47-205ENST00000525257 OR8G2PQ6IF36 304 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 C15orf40Q8WUR7 153 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 KRTAP4-5Q9BYR2 181 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 NAA50Q9GZZ1 169 aaKnown RBP17.01■□□□□ 0.31
USP47-205ENST00000525257 PRR13Q9NZ81 148 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 PFDN2Q9UHV9 154 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 GOLT1BQ9Y3E0 138 aa17.01■□□□□ 0.31
USP47-205ENST00000525257 LOC102723971A0A1B0GUV8 181 aa17■□□□□ 0.31
USP47-205ENST00000525257 ZFP92A6NM28 416 aa17■□□□□ 0.31
USP47-205ENST00000525257 GABARAPH6UMI1 98 aa17■□□□□ 0.31
USP47-205ENST00000525257 SOCS3O14543 225 aa17■□□□□ 0.31
USP47-205ENST00000525257 GABARAPO95166 117 aa17■□□□□ 0.31
USP47-205ENST00000525257 ZNF90Q03938 601 aa17■□□□□ 0.31
USP47-205ENST00000525257 SURF2Q15527 256 aaPredicted RBP17■□□□□ 0.31
USP47-205ENST00000525257 RNF212Q495C1 297 aa17■□□□□ 0.31
USP47-205ENST00000525257 CLUHP3Q96NS8 147 aa17■□□□□ 0.31
USP47-205ENST00000525257 C7orf50Q9BRJ6 194 aaKnown RBP17■□□□□ 0.31
USP47-205ENST00000525257 YTHDF2Q9Y5A9 579 aaKnown RBP17■□□□□ 0.31
USP47-205ENST00000525257 TMEM56-RWDD3S4R434 201 aa17■□□□□ 0.31
USP47-205ENST00000525257 DISC1C4P0D8 188 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 F6UB75 175 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 HBE1P02100 147 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 LYZP61626 148 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 PSG9Q00887 426 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 ZNF79Q15937 498 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 TMEM88Q6PEY1 159 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 LGI3Q8N145 548 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 C1orf158Q8N1D5 194 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 DTD1Q8TEA8 209 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 GPR132Q9UNW8 380 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 U3KQ87 197 aa16.99■□□□□ 0.31
USP47-205ENST00000525257 SUPT4H1P63272 117 aaKnown RBP16.98■□□□□ 0.31
USP47-205ENST00000525257 OXA1LQ15070 435 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 C1orf134Q5TEV5 83 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 FAM78BQ5VT40 261 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 MIXL1Q9H2W2 232 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 RBKSQ9H477 322 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 CACFD1Q9UGQ2 172 aa16.98■□□□□ 0.31
USP47-205ENST00000525257 IGKV1D-37A0A075B6S9 117 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 SSBP1Q04837 148 aaKnown RBP16.97■□□□□ 0.31
USP47-205ENST00000525257 GAMTQ14353 236 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 SPATA31B1PQ5VZV4 182 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 EBLN2Q6P2I7 272 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 OR4C16Q8NGL9 310 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 HSPB7Q9UBY9 170 aa16.97■□□□□ 0.31
USP47-205ENST00000525257 PAX9P55771 341 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 DAD1P61803 113 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms