RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	ACSBG2	Q5FVE4	666 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	HACD4	Q5VWC8	232 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	ZFP2	Q6ZN57	461 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	TIFAB	Q6ZNK6	161 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	CALHM3	Q86XJ0	350 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	OR10X1	Q8NGY0	326 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	ISOC1	Q96CN7	298 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	CMBL	Q96DG6	245 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	DIRAS2	Q96HU8	199 aa		2.84	□□□□□ -1.95
SREK1-213	ENST00000523655	FLG2	Q5D862	2391 aa	Predicted RBP	2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	OR5H14	A6NHG9	310 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF860	A6NHJ4	632 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	IGLL5	B9A064	214 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DISC1	C4P0D8	188 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DEDD	O75618	318 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CGB3	P0DN86	165 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CGB7	P0DN87	165 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CD79A	P11912	226 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CTLA4	P16410	223 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CDK2	P24941	298 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	MAP2K4	P45985	399 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	OR1E2	P47887	323 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	GZMM	P51124	257 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	SNRPD2	P62316	118 aa	Known RBP	2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF816	Q0VGE8	651 aa	Predicted RBP	2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	PMAIP1	Q13794	54 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	ENDOG	Q14249	297 aa	Known RBP	2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	FAM201A	Q5SY85	155 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DHRS4L2	Q6PKH6	230 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	AMN1	Q8IY45	258 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DEFB125	Q8N687	156 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	FER1L6-AS1	Q8NA97	138 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	OR4A5	Q8NH83	315 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	FAM172A	Q8WUF8	416 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	FRZB	Q92765	325 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	POP5	Q969H6	163 aa	Known RBP	2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DCUN1D1	Q96GG9	259 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	PYURF	Q96I23	114 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	ABHD14B	Q96IU4	210 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	CEP19	Q96LK0	163 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	OR52E6	Q96RD3	313 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	TRIB3	Q96RU7	358 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	TSSK6	Q9BXA6	273 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DCSTAMP	Q9H295	470 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	RNF122	Q9H9V4	155 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF391	Q9UJN7	358 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655	DNAH2	Q9P225	4427 aa		2.83	□□□□□ -1.96
SREK1-213	ENST00000523655		K7ERS5	55 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	NRAS	P01111	189 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	HRAS	P01112	189 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	KRAS	P01116	189 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	PDYN	P01213	254 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	FABP1	P07148	127 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	OR4E1	P0C645	316 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	CCL1	P22362	96 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	MPV17	P39210	176 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	POLR2G	P62487	172 aa	Known RBP eCLIP	2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	UNQ9165/PRO28630	Q6UXU0	137 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	HIST2H3A	Q71DI3	136 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	TMEM144	Q7Z5S9	345 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	LYG2	Q86SG7	212 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	SBSPON	Q8IVN8	264 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	LY6G5B	Q8NDX9	201 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	FNDC9	Q8TBE3	224 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	MUCL1	Q96DR8	90 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	FOPNL	Q96NB1	174 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	TMEM109	Q9BVC6	243 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	C16orf95	Q9H693	158 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF286A	Q9HBT8	521 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	FKBP14	Q9NWM8	211 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF586	Q9NXT0	402 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	TAS2R1	Q9NYW7	299 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF230	Q9UIE0	474 aa	Predicted RBP	2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	CARHSP1	Q9Y2V2	147 aa	Known RBP	2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	WASHC3	Q9Y3C0	194 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	MRPS16	Q9Y3D3	137 aa	Known RBP	2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	FIS1	Q9Y3D6	152 aa		2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	2.82	□□□□□ -1.96
SREK1-213	ENST00000523655	APOB	P04114	4563 aa	Known RBP	2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	IGKV3D-11	A0A0A0MRZ8	115 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	IGKV1-12	A0A0C4DH73	117 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	PVALEF	A0A1B0GWK0	134 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	PQLC2L	A1A4F0	135 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF878	C9JN71	531 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	2.81	□□□□□ -1.96
SREK1-213	ENST00000523655		M0R381	172 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	PSMD12	O00232	456 aa	Predicted RBP	2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	PGRMC1	O00264	195 aa	Known RBP	2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	NOS1AP	O75052	506 aa	Predicted RBP	2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	STK16	O75716	305 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	MT-CO2	P00403	227 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	IGKV1D-12	P01611	117 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	COL8A2	P25067	703 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	CMPK1	P30085	196 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	HIST1H3A	P68431	136 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	H3F3A	P84243	136 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	DEFB112	Q30KQ8	113 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	GLT6D1	Q7Z4J2	308 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF676	Q8N7Q3	588 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	OR4X1	Q8NH49	305 aa		2.81	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms