RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 RUNX1Q01196 453 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 CD164Q04900 197 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 TSPAN31Q12999 210 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 TRAM1Q15629 374 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 PDZD11Q5EBL8 140 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 LCN8Q6JVE9 175 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 C3orf62Q6ZUJ4 267 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 SPATA12Q7Z6I5 190 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 UBE2DNLQ8IWF7 75 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 HS3ST5Q8IZT8 346 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 KRTCAP2Q8N6L1 136 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 ZNF676Q8N7Q3 588 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 ST20-AS1Q8NBB2 130 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 OR10W1Q8NGF6 305 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 OR2AE1Q8NHA4 323 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 SGTBQ96EQ0 304 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 RBP7Q96R05 134 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 APOL4Q9BPW4 351 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 C20orf144Q9BQM9 153 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 C1orf50Q9BV19 199 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 GGTLC1Q9BX51 225 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 ALX4Q9H161 411 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-206ENST00000523469 TMEM27Q9HBJ8 222 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 INIPQ9NRY2 104 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 TAS2R5Q9NYW4 299 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 CALML5Q9NZT1 146 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 AP3M1Q9Y2T2 418 aa2.93□□□□□ -1.94
CPNE3-206ENST00000523469 VPS13BQ7Z7G8 4022 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 C17orf98A8MV24 154 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR11H12B2RN74 326 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 KRBOX1C9JBD0 128 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 M0R036 132 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 PGRMC1O00264 195 aaKnown RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 CRXO43186 299 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 IFNA14P01570 189 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 RPSAP08865 295 aaKnown RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 LINC00032P0C843 101 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 ZNF728P0DKX0 622 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 P0DMU3 169 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 FAM231AP0DMU4 169 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 FAM231CP0DMU5 169 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 CD37P11049 281 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 PVALBP20472 110 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 PFN2P35080 140 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 RPL23P62829 140 aaKnown RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 DEFB135Q30KP9 77 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 LPCAT4Q643R3 524 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 THOC7Q6I9Y2 204 aaKnown RBP2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR2T5Q6IEZ7 315 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 CBR4Q8N4T8 237 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR1M1Q8NGA1 313 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR52L1Q8NGH7 329 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR10Z1Q8NGY1 313 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 OR2T29Q8NH02 315 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 PTH2Q96A98 100 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 WFDC6Q9BQY6 131 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 MED4Q9NPJ6 270 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 FGFR1OP2Q9NVK5 253 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 SLC22A13Q9Y226 551 aa2.92□□□□□ -1.94
CPNE3-206ENST00000523469 LOC102724200A0A096LPH7 203 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 A0A1W2PQL4 384 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 FAM183AA6NL82 134 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 LEUTXA8MZ59 168 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 F5H5K5 113 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 F5H768 121 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 H3BQF6 201 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 H7C1H1 209 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 RER1O15258 196 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 FABP7O15540 132 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 TGOLN2O43493 480 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 IFNA10P01566 189 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 IGHV3-11P01762 117 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 RBP4P02753 201 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 IGKV4-1P06312 121 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 CD7P09564 240 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 PSMB8P28062 276 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 EDDM3BP56851 147 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 CXCR4P61073 352 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 POLR2GP62487 172 aaKnown RBP eCLIP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 RPL18Q07020 188 aaKnown RBP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 MLLT11Q13015 90 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 OR1Q1Q15612 314 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 SMARCD3Q6STE5 483 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 LINC00304Q8N9R0 145 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 OR4P4Q8NGL7 312 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 SLC35B4Q969S0 331 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 PPP3R2Q96LZ3 170 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 KCTD7Q96MP8 289 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 ZNF714Q96N38 554 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 SAMD10Q9BYL1 202 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 TMEM133Q9H2Q1 129 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 RERGLQ9H628 205 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 SPANXB1Q9NS25 103 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-206ENST00000523469 PYCARDQ9ULZ3 195 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 TP53TG1Q9Y2A0 90 aa2.91□□□□□ -1.94
CPNE3-206ENST00000523469 IZUMO1RA6ND01 250 aa2.9□□□□□ -1.95
CPNE3-206ENST00000523469 ARRDC5A6NEK1 342 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms