RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HEYLQ9NQ87 328 aaPredicted RBP8.1□□□□□ -1.11
SDCBP-211ENST00000523441 PTTG2Q9NZH5 202 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 KLK11Q9UBX7 282 aa8.1□□□□□ -1.11
SDCBP-211ENST00000523441 GSTZ1O43708 216 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-211ENST00000523441 ATP5G1P05496 136 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 PRB4P10163 310 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-211ENST00000523441 AZU1P20160 251 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 ATP5G3P48201 142 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 ZNF79Q15937 498 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 SPINK13Q1W4C9 94 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 TRIM16LQ309B1 348 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 SP6Q3SY56 376 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 OR4C16Q8NGL9 310 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 NPIPB3Q92617 1050 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 PPP1R14BQ96C90 147 aa8.09□□□□□ -1.11
SDCBP-211ENST00000523441 A0A0A6YYH2 397 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 A6NJ64 397 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 LYRM9A8MSI8 78 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 EBAG9O00559 213 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 PSG1P11464 419 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 PSMB3P49720 205 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 YPEL3P61236 119 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-211ENST00000523441 RNASE12Q5GAN4 147 aaKnown RBP8.08□□□□□ -1.12
SDCBP-211ENST00000523441 LPCAT3Q6P1A2 487 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 LYSMD2Q8IV50 215 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 BAP18Q8IXM2 172 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 S100A16Q96FQ6 103 aaKnown RBP8.08□□□□□ -1.12
SDCBP-211ENST00000523441 TP53RKQ96S44 253 aa8.08□□□□□ -1.12
SDCBP-211ENST00000523441 SEPSECSQ9HD40 501 aaKnown RBP8.08□□□□□ -1.12
SDCBP-211ENST00000523441 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 A0A0J9YX75 114 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 TOMM40O96008 361 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 ELK1P19419 428 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 PRSS3P35030 304 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
SDCBP-211ENST00000523441 LINC00315P59091 139 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 LYZP61626 148 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 SPARTQ8N0X7 666 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 NRG4Q8WWG1 115 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 GNPNAT1Q96EK6 184 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-211ENST00000523441 RNF125Q96EQ8 232 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 IGF2BP2-AS1Q96M15 143 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 ABHD1Q96SE0 405 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 Q9H3A6 140 aa8.07□□□□□ -1.12
SDCBP-211ENST00000523441 TRAV26-1A0A087WT03 109 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 CEBPZOSA8MTT3 80 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 ANKRD65E5RJM6 399 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 EREGO14944 169 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 INSP01308 110 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 IFNA5P01569 189 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 HTR2BP41595 481 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 ALDH3B2P48448 385 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 OR2F1Q13607 317 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 IGFL4Q6B9Z1 124 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 SAMD12Q8N8I0 201 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 RRNAD1Q96FB5 475 aaKnown RBP8.06□□□□□ -1.12
SDCBP-211ENST00000523441 LINC01587Q99440 93 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 SLC25A39Q9BZJ4 359 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-211ENST00000523441 RPRMQ9NS64 109 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 FAM212BQ9NTI7 297 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-211ENST00000523441 DOK5Q9P104 306 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 BLOC1S6Q9UL45 172 aa8.06□□□□□ -1.12
SDCBP-211ENST00000523441 CBY3A6NI87 242 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 INS-IGF2F8WCM5 200 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 DNAH10OSP0CZ25 163 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 SLC25A4P12235 298 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 BTF3P20290 206 aaKnown RBP8.05□□□□□ -1.12
SDCBP-211ENST00000523441 TGFBR1P36897 503 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 PAX9P55771 341 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 PIGPP57054 158 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 ESRGQ1W209 222 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 SNX29P2Q8IUI4 249 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 OR8I2Q8N0Y5 310 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 SLC24A4Q8NFF2 622 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 C17orf77Q96MU5 243 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 SLC25A22Q9H936 323 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 ANAPC10Q9UM13 185 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
SDCBP-211ENST00000523441 C3orf85A0A1B0GTC6 90 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 ZFP92A6NM28 416 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 SOCS3O14543 225 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 ATG12O94817 140 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 P0C879 139 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 NAT1P18440 290 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 CNN1P51911 297 aaKnown RBP8.04□□□□□ -1.12
SDCBP-211ENST00000523441 SCAND1P57086 179 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 ZNF90Q03938 601 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 UBE2NLQ5JXB2 153 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 ARRDC1Q8N5I2 433 aa8.04□□□□□ -1.12
SDCBP-211ENST00000523441 OR11H7Q8NGC8 314 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms