RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 OR2T35Q8NGX2 323 aa6.81□□□□□ -1.32
SDC2-207ENST00000522911 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
SDC2-207ENST00000522911 DCANP1Q8TF63 244 aa6.81□□□□□ -1.32
SDC2-207ENST00000522911 MRGPRFQ96AM1 343 aa6.81□□□□□ -1.32
SDC2-207ENST00000522911 U3KQE9 123 aa6.81□□□□□ -1.32
SDC2-207ENST00000522911 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGKV3-7A0A075B6H7 116 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 TRAV30A0A087WSZ9 112 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGHV3-49A0A0A0MS15 119 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 HMSDA8MTL9 139 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGLL5B9A064 214 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 SMLR1H3BR10 107 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 NDUFB6O95139 128 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGKV1-17P01599 117 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 RNASE2P10153 161 aaKnown RBP6.8□□□□□ -1.32
SDC2-207ENST00000522911 TBPP20226 339 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 LGALSLQ3ZCW2 172 aaPredicted RBP6.8□□□□□ -1.32
SDC2-207ENST00000522911 COMMD7Q86VX2 200 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 ARRDC1Q8N5I2 433 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 PINX1Q96BK5 328 aaKnown RBP6.8□□□□□ -1.32
SDC2-207ENST00000522911 METTL26Q96S19 204 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 MGAT4CQ9UBM8 478 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 X6R8D5 127 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 RYR1P21817 5038 aa6.8□□□□□ -1.32
SDC2-207ENST00000522911 IGHV3OR16-13A0A075B7E8 117 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 IGHV3-74A0A0B4J1X5 117 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 KRBOX1C9JBD0 128 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 L7N2F9 121 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 HLA-DMBP28068 263 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 P2RY1P47900 373 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 CCR6P51684 374 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 FGL1Q08830 312 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 OPCMLQ14982 345 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 TOR2AQ5JU69 321 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
SDC2-207ENST00000522911 LEMD1Q68G75 181 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 FAM219AQ8IW50 185 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 OR52E5Q8NH55 327 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 OR52I2Q8NH67 350 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 NARS2Q96I59 477 aaKnown RBP6.79□□□□□ -1.32
SDC2-207ENST00000522911 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 FNDC4Q9H6D8 234 aaPredicted RBP6.79□□□□□ -1.32
SDC2-207ENST00000522911 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
SDC2-207ENST00000522911 IGHV4-4A0A075B6R2 117 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 HELTA6NFD8 242 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 IGHV3-48P01763 117 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 AKAIN1P0CW23 69 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 MED14OSP0DP75 135 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 CXCL3P19876 107 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 UCP1P25874 307 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 YPEL3P61236 119 aaPredicted RBP6.78□□□□□ -1.32
SDC2-207ENST00000522911 Q6ZTC4 211 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 SLC35G3Q8N808 338 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 OR11H4Q8NGC9 324 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 NEU1Q99519 415 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 SLC25A21Q9BQT8 299 aaPredicted RBP6.78□□□□□ -1.32
SDC2-207ENST00000522911 MTFP1Q9UDX5 166 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 CACFD1Q9UGQ2 172 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 RABAC1Q9UI14 185 aa6.78□□□□□ -1.32
SDC2-207ENST00000522911 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
SDC2-207ENST00000522911 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 RPS10-NUDT3A0A1W2PQS6 291 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 DEFB4AO15263 64 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 IFNA17P01571 189 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 P0DMU3 169 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 SLC25A4P12235 298 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 S100A11P31949 105 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 AKR1C2P52895 323 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 PIGPP57054 158 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 TAS2R19P59542 299 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 SPCS3P61009 180 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 LGALS9BQ3B8N2 356 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 C2orf83Q53S99 150 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 RNASE12Q5GAN4 147 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 STXBP6Q8NFX7 210 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 OR1S2Q8NGQ3 325 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 RNASEH2CQ8TDP1 164 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 RBPMSQ93062 196 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 TP53RKQ96S44 253 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 PDCD10Q9BUL8 212 aa6.77□□□□□ -1.33
SDC2-207ENST00000522911 MRPL36Q9P0J6 103 aaKnown RBP6.77□□□□□ -1.33
SDC2-207ENST00000522911 A0A0D9SG52 128 aa6.76□□□□□ -1.33
SDC2-207ENST00000522911 C3orf85A0A1B0GTC6 90 aa6.76□□□□□ -1.33
SDC2-207ENST00000522911 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
SDC2-207ENST00000522911 CDS2O95674 445 aa6.76□□□□□ -1.33
SDC2-207ENST00000522911 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
SDC2-207ENST00000522911 IGLC1P0CG04 106 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms