RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RNF150Q9ULK6 438 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 A0A0G2JLM5 398 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 A0A1B0GU03 582 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 H3BUA1 57 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 BOLA2-SMG1P6H3BVE0 249 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 GOSR2O14653 212 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 ATG12O94817 140 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 S1PR2O95136 353 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 MPC2O95563 127 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 IFNA4P05014 189 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 MFAP2P55001 183 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 RPL30P62888 115 aaKnown RBP4.81□□□□□ -1.64
SDCBP-210ENST00000522843 CATR1Q13166 79 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 PSG5Q15238 335 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 RBMY1FQ15415 496 aaKnown RBP4.81□□□□□ -1.64
SDCBP-210ENST00000522843 POU2AF1Q16633 256 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 SP6Q3SY56 376 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 LGALSLQ3ZCW2 172 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-210ENST00000522843 GGNBP1Q5YKI7 109 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 Q6ZR54 194 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 SLC16A13Q7RTY0 426 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 LYZL2Q7Z4W2 148 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 DYNLRB2Q8TF09 96 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 PPP1R1CQ8WVI7 109 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF355PQ9NSJ1 428 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 MLXQ9UH92 298 aa4.81□□□□□ -1.64
SDCBP-210ENST00000522843 SAA2-SAA4A0A096LPE2 208 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 TRAV14DV4A0A0A6YYC5 116 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 C16orf90A8MZG2 172 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 FAM90A26D6RGX4 464 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 UBE2CO00762 179 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 DEFB4AO15263 64 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 PAGE4O60829 102 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 ADAP1O75689 374 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SIX6O95475 246 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 HPRT1P00492 218 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 IGKV1-39P01597 117 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 IGKV1D-39P04432 117 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SERPINE2P07093 398 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 FGF2P09038 288 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SAA2P0DJI9 122 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-210ENST00000522843 CT45A6P0DMU7 189 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 CT45A5P0DMU8 189 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 CT45A7P0DMV0 189 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 RRASP10301 218 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 C4BPBP20851 252 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF345Q14585 488 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 LGALS9BQ3B8N2 356 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 PRSS54Q6PEW0 395 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 Q6ZTC4 211 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 C9orf62Q8N4C0 152 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 OR4D5Q8NGN0 318 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 GRPEL2Q8TAA5 225 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SEC22AQ96IW7 307 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM68Q96MH6 324 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SPIN2AQ99865 258 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 RNF5Q99942 180 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 SPIN2BQ9BPZ2 258 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 OR2D2Q9H210 308 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 C11orf1Q9H5F2 150 aa4.8□□□□□ -1.64
SDCBP-210ENST00000522843 TECRQ9NZ01 308 aaKnown RBP4.8□□□□□ -1.64
SDCBP-210ENST00000522843 METTL1Q9UBP6 276 aaKnown RBP4.8□□□□□ -1.64
SDCBP-210ENST00000522843 RBM7Q9Y580 266 aaKnown RBP4.8□□□□□ -1.64
SDCBP-210ENST00000522843 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 A0A0D9SG52 128 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM213A2RRL7 107 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 C5orf51A6NDU8 294 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 MPTX1A8MV57 137 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 H0YJW9 148 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 TOMM40O96008 361 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 IGKV1-5P01602 117 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 CBLN1P23435 193 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 MC5RP33032 325 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 LPAR6P43657 344 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 APOC4P55056 127 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 TAS2R30P59541 319 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 PJVKQ0ZLH3 352 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 OR2F1Q13607 317 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 FXYD3Q14802 87 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 PLGLAQ15195 96 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 MRGPRG-AS1Q2M3A8 158 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-210ENST00000522843 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF546Q86UE3 836 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 SPAG16Q8N0X2 631 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 POM121L12Q8N7R1 296 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 SLC35G3Q8N808 338 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 OR52E5Q8NH55 327 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 GPR146Q96CH1 333 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 AQP10Q96PS8 301 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 MFFQ9GZY8 342 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 C11orf68Q9H3H3 251 aaKnown RBP4.79□□□□□ -1.64
SDCBP-210ENST00000522843 COMMD9Q9P000 198 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 UBQLN2Q9UHD9 624 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 TNFSF18Q9UNG2 199 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 PRELID3BQ9Y3B1 194 aa4.79□□□□□ -1.64
SDCBP-210ENST00000522843 IGLV2-18A0A075B6J9 118 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms