RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	OR8U1	Q8NH10	309 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	SGMS2	Q8NHU3	365 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	RAB2B	Q8WUD1	216 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	ACOT12	Q8WYK0	555 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	RASL10A	Q92737	203 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	S100A16	Q96FQ6	103 aa	Known RBP	5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	GINS4	Q9BRT9	223 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	MAP1LC3C	Q9BXW4	147 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	OR2D2	Q9H210	308 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	XCL2	Q9UBD3	114 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	ANXA10	Q9UJ72	324 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	ANAPC10	Q9UM13	185 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798	NOTCH3	Q9UM47	2321 aa		5.19	□□□□□ -1.58
SPIDR-215	ENST00000521798		A0A0J9YWU9	116 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	MEIS3P1	A6NDR6	274 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	OR5H14	A6NHG9	310 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	NCBP2L	A6PVI3	153 aa	Known RBP	5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	SMKR1	H3BMG3	65 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	IGHV3-23	P01764	117 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	IGHG2	P01859	326 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	HLA-DQB1	P01920	261 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	CTXN2	P0C2S0	81 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	CD28	P10747	220 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	FOLR2	P14207	255 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	ELK1	P19419	428 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	NFYA	P23511	347 aa	Predicted RBP	5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	CNTFR	P26992	372 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	CBX5	P45973	191 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	ACTB	P60709	375 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	MMD	Q15546	238 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	ZNF726P1	Q15940	193 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	C10orf99	Q6UWK7	81 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	FAM131A	Q6UXB0	335 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	DYNC2LI1	Q8TCX1	351 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	AP3S1	Q92572	193 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	ISOC1	Q96CN7	298 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	SOST	Q9BQB4	213 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	HSPB9	Q9BQS6	159 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	SDHAF2	Q9NX18	166 aa		5.18	□□□□□ -1.58
SPIDR-215	ENST00000521798	PLXNB1	O43157	2135 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	IGKV1D-13	A0A0B4J2D9	117 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798		A0A0G2JLM5	398 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798		J3QRK9	145 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798		K7EMT4	169 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798		M0R1X1	148 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	NDUFA3	O95167	84 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	OXT	P01178	125 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	IGKV1-16	P04430	117 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	IGKV1-13	P0DP09	117 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	GPX4	P36969	197 aa	Predicted RBP	5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	ARPC4	P59998	168 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	C5orf64	Q2M2E5	130 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	TCTEX1D4	Q5JR98	221 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	SLC35E3	Q7Z769	313 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	ZNF645	Q8N7E2	425 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	POM121L12	Q8N7R1	296 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	NPB	Q8NG41	125 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	EEF1AKMT3	Q96AZ1	226 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	VGLL1	Q99990	258 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	PAXX	Q9BUH6	204 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	MIXL1	Q9H2W2	232 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	MCUB	Q9NWR8	336 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	ZNF107	Q9UII5	783 aa	Predicted RBP	5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	LINC00527	Q9UJ94	153 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	WASHC3	Q9Y3C0	194 aa		5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798	RBM7	Q9Y580	266 aa	Known RBP	5.17	□□□□□ -1.58
SPIDR-215	ENST00000521798		A0A0B4J2A0	478 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	SMIM31	A0A1B0GVY4	71 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	FAM25A	B3EWG3	89 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	FAM25C	B3EWG5	89 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	FAM25G	B3EWG6	89 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798		H7C2Y5	167 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	RBBP9	O75884	186 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	SERF1A	O75920	110 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	HLA-DRB1	P01911	266 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	OR5H8	P0DN80	308 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	PRSS3	P35030	304 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	NDP	Q00604	133 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	CLINT1	Q14677	625 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	CDK10	Q15131	360 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	PSG3	Q16557	428 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	PDPN	Q86YL7	162 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	SNX29P2	Q8IUI4	249 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	STPG2	Q8N412	459 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	BAALC	Q8WXS3	180 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	RNF5	Q99942	180 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	RASL11B	Q9BPW5	248 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	SLIRP	Q9GZT3	109 aa	Known RBP	5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	FBXL15	Q9H469	300 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	IFT46	Q9NQC8	304 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	NECAP2	Q9NVZ3	263 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	SHPK	Q9UHJ6	478 aa		5.16	□□□□□ -1.58
SPIDR-215	ENST00000521798	TET2	Q6N021	2002 aa	Predicted RBP	5.15	□□□□□ -1.58
SPIDR-215	ENST00000521798	PSMB11	A5LHX3	300 aa		5.15	□□□□□ -1.59
SPIDR-215	ENST00000521798	SULT1C2	O00338	296 aa		5.15	□□□□□ -1.59
SPIDR-215	ENST00000521798	RGS5	O15539	181 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms