RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 YIF1AO95070 293 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 TSPAN15O95858 294 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 CFDP00746 253 aaPredicted RBP13.61□□□□□ -0.23
SDC2-205ENST00000520233 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 RPL7L1Q6DKI1 246 aaKnown RBP13.61□□□□□ -0.23
SDC2-205ENST00000520233 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 C9orf62Q8N4C0 152 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 LINC00482Q8N8I6 264 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 BPIFCQ8NFQ6 507 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 TMEM190Q8WZ59 177 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
SDC2-205ENST00000520233 GGTLC1Q9BX51 225 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 NPCDR1Q9BY65 106 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 ZFAND3Q9H8U3 227 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 CYTL1Q9NRR1 136 aa13.61□□□□□ -0.23
SDC2-205ENST00000520233 KANTRA0A1W2PQU2 76 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 WI2-2373I1.2A0A1W2PRP0 233 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 ZNF320A2RRD8 509 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 C17orf112F2Z3M2 114 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 JTBO76095 146 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
SDC2-205ENST00000520233 OPCMLQ14982 345 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 TMEM182Q6ZP80 229 aaPredicted RBP13.6□□□□□ -0.23
SDC2-205ENST00000520233 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
SDC2-205ENST00000520233 A8MWP6 167 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 OVOL1O14753 267 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 IL4P05112 153 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 GATA2P23769 480 aaPredicted RBP13.59□□□□□ -0.23
SDC2-205ENST00000520233 NKX2-5P52952 324 aaPredicted RBP13.59□□□□□ -0.23
SDC2-205ENST00000520233 ELLP55199 621 aaPredicted RBP13.59□□□□□ -0.23
SDC2-205ENST00000520233 PRR20EP86478 221 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 PRR20CP86479 221 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 PRR20DP86480 221 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 PRR20BP86481 221 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 PRR20AP86496 221 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 LAMTOR1Q6IAA8 161 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 ZNF709Q8N972 641 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 C20orf24Q9BUV8 137 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
SDC2-205ENST00000520233 K7EMT4 169 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 LINC00869P0C866 280 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 MIC13Q5XKP0 118 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 STPG3Q8N7X2 389 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 OR9G4Q8NGQ1 327 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 RNF125Q96EQ8 232 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 GINS3Q9BRX5 216 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 RSG1Q9BU20 258 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 PEMTQ9UBM1 199 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 TIMM9Q9Y5J7 89 aa13.58□□□□□ -0.24
SDC2-205ENST00000520233 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 PLP1P60201 277 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 LYZP61626 148 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 USF2Q15853 346 aaPredicted RBP13.57□□□□□ -0.24
SDC2-205ENST00000520233 PXDC1Q5TGL8 231 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 ZNF471Q9BX82 626 aaPredicted RBP13.57□□□□□ -0.24
SDC2-205ENST00000520233 ARV1Q9H2C2 271 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
SDC2-205ENST00000520233 PXMP4Q9Y6I8 212 aa13.57□□□□□ -0.24
SDC2-205ENST00000520233 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 C4BPBP20851 252 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 B2MP61769 119 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
SDC2-205ENST00000520233 TM4SF20Q53R12 229 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 Q6ZRG5 221 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 GNPNAT1Q96EK6 184 aaPredicted RBP13.56□□□□□ -0.24
SDC2-205ENST00000520233 PSMG3Q9BT73 122 aaPredicted RBP13.56□□□□□ -0.24
SDC2-205ENST00000520233 PBDC1Q9BVG4 233 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 SLC39A9Q9NUM3 307 aa13.56□□□□□ -0.24
SDC2-205ENST00000520233 COL6A5A8TX70 2615 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 TMEM213A2RRL7 107 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 NPPCP23582 126 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 IL34Q6ZMJ4 242 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 OR1B1Q8NGR6 318 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 METTL26Q96S19 204 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 ELOVL1Q9BW60 279 aa13.55□□□□□ -0.24
SDC2-205ENST00000520233 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
SDC2-205ENST00000520233 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 C2orf70A6NJV1 201 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 ZNF207O43670 478 aaKnown RBP13.54□□□□□ -0.24
SDC2-205ENST00000520233 CSN3P07498 182 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 HNRNPCP07910 306 aaKnown RBP eCLIP13.54□□□□□ -0.241e-6■■■■□ 19.7
SDC2-205ENST00000520233 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 ORM2P19652 201 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 CD33P20138 364 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 CRYBB3P26998 211 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 MARC2Q969Z3 335 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 RABAC1Q9UI14 185 aa13.54□□□□□ -0.24
SDC2-205ENST00000520233 IGHV7-4-1A0A0J9YVY3 117 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 HYPMO75409 117 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 TPT1P13693 172 aaKnown RBP13.53□□□□□ -0.24
SDC2-205ENST00000520233 CBLN1P23435 193 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 SERF2P84101 59 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 FFAR4Q5NUL3 377 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 SLC51BQ86UW2 128 aa13.53□□□□□ -0.24
SDC2-205ENST00000520233 OR2G3Q8NGZ4 309 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms