RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 EP300Q09472 2414 aaPredicted RBP4.05□□□□□ -1.76
SDC2-204ENST00000519914 IGKV1D-37A0A075B6S9 117 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 K7EN84 100 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 ISLRO14498 428 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 KLK10O43240 276 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 NDUFB3O43676 98 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 FOXH1O75593 365 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
SDC2-204ENST00000519914 MC5RP33032 325 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 PPOXP50336 477 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 LGALS4P56470 323 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 PLP1P60201 277 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 RHOGP84095 191 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 BSPH1Q075Z2 132 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 Q0VG73 95 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 LRRC10Q5BKY1 277 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 FAM231DQ6ZW35 169 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 MIR17HGQ75NE6 70 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 TEX45Q8NA69 505 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 NECAP1Q8NC96 275 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 DEFB108BQ8NET1 73 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 OR4P4Q8NGL7 312 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 OR1L4Q8NGR5 311 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 OR9G1Q8NH87 305 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 SGMS2Q8NHU3 365 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 C8orf46Q8TAG6 207 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 SSMEM1Q8WWF3 244 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 RNASE6Q93091 150 aaKnown RBP4.05□□□□□ -1.76
SDC2-204ENST00000519914 FLYWCH2Q96CP2 140 aaKnown RBP4.05□□□□□ -1.76
SDC2-204ENST00000519914 IGF2BP2-AS1Q96M15 143 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 HARBI1Q96MB7 349 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 RNF5Q99942 180 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 VKORC1Q9BQB6 163 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 SRSF8Q9BRL6 282 aaKnown RBP4.05□□□□□ -1.76
SDC2-204ENST00000519914 VAMP8Q9BV40 100 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 SLC25A2Q9BXI2 301 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 GNB1LQ9BYB4 327 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 SAP30LQ9HAJ7 183 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 NGBQ9NPG2 151 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 CBLN4Q9NTU7 201 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 CTSZQ9UBR2 303 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 WASHC3Q9Y3C0 194 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 TRAPPC1Q9Y5R8 145 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 COX11Q9Y6N1 276 aa4.05□□□□□ -1.76
SDC2-204ENST00000519914 A0A0U1RQK1 487 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 SMIM27A0A1W2PRY6 76 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 TCRBV4S1A1TA0A5B7 111 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 ZNF320A2RRD8 509 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 GGTLC3B5MD39 225 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 B9A039 149 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 E7EQL1 145 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 K7ENP7 123 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 CCL25O15444 150 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 SLC25A17O43808 307 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 IGLV1-47P01700 117 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 IGLV2-8P01709 118 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 IGHV3-7P01780 117 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 MT-ND6P03923 174 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 SMIM17P0DL12 118 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 IGHV1-8P0DP01 117 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 MYOD1P15172 320 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 CEACAM3P40198 252 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 MYCNOSP40205 109 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 COMPP49747 757 aaPredicted RBP4.04□□□□□ -1.76
SDC2-204ENST00000519914 SUB1P53999 127 aaKnown RBP eCLIP4.04□□□□□ -1.76
SDC2-204ENST00000519914 TPPP2P59282 170 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 CX3CL1P78423 397 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 RBPJQ06330 500 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 PSG5Q15238 335 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 VMA21Q3ZAQ7 101 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 RASL11AQ6T310 242 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 TEX43Q6ZNM6 134 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 ZCCHC24Q8N2G6 241 aaKnown RBP4.04□□□□□ -1.76
SDC2-204ENST00000519914 WIPF2Q8TF74 440 aaPredicted RBP4.04□□□□□ -1.76
SDC2-204ENST00000519914 TMEM37Q8WXS4 190 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 CFHR4Q92496 578 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 SNRNP40Q96DI7 357 aaKnown RBP4.04□□□□□ -1.76
SDC2-204ENST00000519914 TRGV9Q99603 122 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 COMMD5Q9GZQ3 224 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 CST9LQ9H4G1 147 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 LOC400499M0QZD8 3231 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 TTC28Q96AY4 2481 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 MALRD1Q5VYJ5 2156 aa4.04□□□□□ -1.76
SDC2-204ENST00000519914 POLEQ07864 2286 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 IGLC7A0M8Q6 106 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 HELTA6NFD8 242 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 ZNF705FA8MVS1 300 aaPredicted RBP4.03□□□□□ -1.76
SDC2-204ENST00000519914 E7EUB6 86 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 J3QR89 54 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 CORTO00230 105 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 REG1AP05451 166 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 ZNF705DP0CH99 300 aaPredicted RBP4.03□□□□□ -1.76
SDC2-204ENST00000519914 ZNF705BP0CI00 300 aaPredicted RBP4.03□□□□□ -1.76
SDC2-204ENST00000519914 CCL3L1P16619 93 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 GNG4P50150 75 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 CCL8P80075 99 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 WT1-ASQ06250 92 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 PRSS8Q16651 343 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 RPEL1Q2QD12 228 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms