RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 STXBP6Q8NFX7 210 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 CHAC2Q8WUX2 184 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 TXN2Q99757 166 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 HRH4Q9H3N8 390 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
TRIM35-202ENST00000519219 NAA60Q9H7X0 242 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 KCNIP3Q9Y2W7 256 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 PKD1P98161 4303 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 TRAV10A0A0B4J240 114 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 CRYM-AS1A6NIL9 109 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF705EA8MWA4 302 aaPredicted RBP6.29□□□□□ -1.4
TRIM35-202ENST00000519219 FAM25EA8MYX2 175 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 BOLA2-SMG1P6H3BVE0 249 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 TMEM50AO95807 157 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 IGKV1-5P01602 117 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 SULT1A3P0DMM9 295 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 SULT1A4P0DMN0 295 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 EIF2B2P49770 351 aaKnown RBP6.29□□□□□ -1.4
TRIM35-202ENST00000519219 HSPE1P61604 102 aaKnown RBP6.29□□□□□ -1.4
TRIM35-202ENST00000519219 PAFAH1B2P68402 229 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 SRPXP78539 464 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 C12orf74Q32Q52 190 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 ACTL10Q5JWF8 245 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 H2BFWTQ7Z2G1 175 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 OR4A16Q8NH70 328 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 GINS3Q9BRX5 216 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 RTBDNQ9BSG5 229 aaPredicted RBP6.29□□□□□ -1.4
TRIM35-202ENST00000519219 FKBP11Q9NYL4 201 aa6.29□□□□□ -1.4
TRIM35-202ENST00000519219 TRAV2A0A0B4J234 112 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 PIGBOS1A0A0B4J2F0 54 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 A0A0G2JRQ6 117 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 PRSS29PA6NIE9 313 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 IFNA21P01568 189 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 P0C879 139 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
TRIM35-202ENST00000519219 MIFP14174 115 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 P2RY1P47900 373 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 GSG1LQ6UXU4 331 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF600Q6ZNG1 722 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 LINC00336Q6ZUF6 198 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 RNASE11Q8TAA1 199 aaKnown RBP6.28□□□□□ -1.4
TRIM35-202ENST00000519219 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 MITD1Q8WV92 249 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 TMEM230Q96A57 120 aa6.28□□□□□ -1.4
TRIM35-202ENST00000519219 DEFB131BA0A096LNP1 70 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 C3orf85A0A1B0GTC6 90 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 CCSO14618 274 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 B3GALNT1O75752 331 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 AMBPP02760 352 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 GIPP09681 153 aaPredicted RBP6.27□□□□□ -1.41
TRIM35-202ENST00000519219 OR5AC1P0C628 307 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 CRYBB3P26998 211 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 DEFB1P60022 68 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 RND3P61587 244 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 DHODHQ02127 395 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 TIGITQ495A1 244 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 PVRIGQ6DKI7 326 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 ZNF575Q86XF7 245 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 TCTE3Q8IZS6 198 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 LGI3Q8N145 548 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 POM121L12Q8N7R1 296 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 ASB13Q8WXK3 278 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 TP53RKQ96S44 253 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 RNF126Q9BV68 326 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
TRIM35-202ENST00000519219 IGLV2-18A0A075B6J9 118 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 A0A0B4J2A0 478 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SIX6O95475 246 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 HOXB5P09067 269 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SPP1P10451 314 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 CXCL3P19876 107 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 NPPCP23582 126 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 NPBWR1P48145 328 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 RAP2BP61225 183 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SUPT4H1P63272 117 aaKnown RBP6.26□□□□□ -1.41
TRIM35-202ENST00000519219 ERHP84090 104 aaKnown RBP6.26□□□□□ -1.41
TRIM35-202ENST00000519219 CD300CQ08708 224 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SP6Q3SY56 376 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 PSMG4Q5JS54 123 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 TMEM268Q5VZI3 342 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SLC35G3Q8N808 338 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 OR2T35Q8NGX2 323 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 GRAMD2BQ96HH9 432 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 ST6GAL2Q96JF0 529 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 RAB40CQ96S21 281 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SHPKQ9UHJ6 478 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 HSPG2P98160 4391 aa6.26□□□□□ -1.41
TRIM35-202ENST00000519219 SMLR1H3BR10 107 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 CLN5O75503 358 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 ATG12O94817 140 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 C1QBP02746 253 aa6.25□□□□□ -1.41
TRIM35-202ENST00000519219 CD5P06127 495 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms