RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
PCM1-206ENST00000518537 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
PCM1-206ENST00000518537 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
PCM1-206ENST00000518537 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
PCM1-206ENST00000518537 Q8WTZ3 238 aa13.05□□□□□ -0.32
PCM1-206ENST00000518537 C21orf62Q9NYP8 219 aa13.05□□□□□ -0.32
PCM1-206ENST00000518537 A0A096LNT2 108 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 TOMM40O96008 361 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 CRYBB3P26998 211 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 FXYD5Q96DB9 178 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
PCM1-206ENST00000518537 FBXL7Q9UJT9 491 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 C1orf196B1AJZ1 125 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 H7BYZ3 331 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 ANAPC16Q96DE5 110 aa13.04□□□□□ -0.32
PCM1-206ENST00000518537 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
PCM1-206ENST00000518537 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
PCM1-206ENST00000518537 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 PGPEP1LA6NFU8 196 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 AVPP01185 164 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 CXCL1P09341 107 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 RPL35P42766 123 aaKnown RBP13.03□□□□□ -0.32
PCM1-206ENST00000518537 RAB5BP61020 215 aa13.03□□□□□ -0.32
PCM1-206ENST00000518537 YPEL3P61236 119 aaPredicted RBP13.03□□□□□ -0.32
PCM1-206ENST00000518537 SLC25A39Q9BZJ4 359 aaPredicted RBP13.03□□□□□ -0.32
PCM1-206ENST00000518537 MRPL27Q9P0M9 148 aaKnown RBP13.03□□□□□ -0.32
PCM1-206ENST00000518537 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
PCM1-206ENST00000518537 TGIF2-C20orf24A0A0A6YYL0 155 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 HELTA6NFD8 242 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 LINC01548A6NM66 108 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 IGHV3-23P01764 117 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.33
PCM1-206ENST00000518537 LY6EQ16553 131 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 LEMD1Q68G75 181 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 ZFP82Q8N141 532 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 OR5B12Q96R08 314 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.33
PCM1-206ENST00000518537 C9JCJ5 164 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 RNF223E7ERA6 249 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 H3BUX3 64 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 SNRPCP09234 159 aaKnown RBP13.01□□□□□ -0.33
PCM1-206ENST00000518537 HNF1AP20823 631 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 LRRC75A-AS1Q8N1F1 130 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 BLNKQ8WV28 456 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 MDFIC2A0A1B0GVS7 189 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
PCM1-206ENST00000518537 IL4P05112 153 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 NBEAP1P0C6P0 100 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
PCM1-206ENST00000518537 GALR1P47211 349 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 NECAP1Q8NC96 275 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 OCC1Q8TAD7 63 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 VN1R17PQ8TDU5 208 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 TXN2Q99757 166 aa13.01□□□□□ -0.33
PCM1-206ENST00000518537 WI2-2373I1.2A0A1W2PRP0 233 aa13□□□□□ -0.33
PCM1-206ENST00000518537 G3V318 75 aa13□□□□□ -0.33
PCM1-206ENST00000518537 J3QLI3 93 aa13□□□□□ -0.33
PCM1-206ENST00000518537 TGFAP01135 160 aa13□□□□□ -0.33
PCM1-206ENST00000518537 GP9P14770 177 aa13□□□□□ -0.33
PCM1-206ENST00000518537 S100PP25815 95 aa13□□□□□ -0.33
PCM1-206ENST00000518537 C9orf152Q5JTZ5 239 aa13□□□□□ -0.33
PCM1-206ENST00000518537 ZNF329Q86UD4 541 aa13□□□□□ -0.33
PCM1-206ENST00000518537 C2CD4CQ8TF44 421 aa13□□□□□ -0.33
PCM1-206ENST00000518537 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
PCM1-206ENST00000518537 A6NDX4 124 aa13□□□□□ -0.33
PCM1-206ENST00000518537 OR2T8A6NH00 312 aa13□□□□□ -0.33
PCM1-206ENST00000518537 PPP1R2P9O14990 202 aa13□□□□□ -0.33
PCM1-206ENST00000518537 CD99P14209 185 aa13□□□□□ -0.33
PCM1-206ENST00000518537 GNG4P50150 75 aa13□□□□□ -0.33
PCM1-206ENST00000518537 RANP62826 216 aaKnown RBP13□□□□□ -0.33
PCM1-206ENST00000518537 AMY1AP04745 511 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 RHOGP84095 191 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 KLK9Q2XQG4 91 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 Q5PR19 223 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 S100A7AQ86SG5 101 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 SHANK2-AS3Q9BTD1 123 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 TMEM14CQ9P0S9 112 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 KLK9Q9UKQ9 250 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 ASH1LQ9NR48 2969 aaKnown RBP12.99□□□□□ -0.33
PCM1-206ENST00000518537 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
PCM1-206ENST00000518537 H3BRN7 92 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 PLA2G2AP14555 144 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 FCGR2BP31994 310 aaPredicted RBP12.98□□□□□ -0.33
PCM1-206ENST00000518537 C15orf32Q32M92 178 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 CENPWQ5EE01 88 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 ZNF600Q6ZNG1 722 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 SFRP2Q96HF1 295 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 FAM210BQ96KR6 192 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 PITPNC1Q9UKF7 332 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 SPG11Q96JI7 2443 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 TRAV41A0A0B4J266 112 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 J3QKU1 62 aa12.98□□□□□ -0.33
PCM1-206ENST00000518537 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
PCM1-206ENST00000518537 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms