RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PFDN2Q9UHV9 154 aa15.4■□□□□ 0.06
USP53-208ENST00000514305 FXYD6-FXYD2A0A087WZ82 144 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 TRAV14DV4A0A0A6YYC5 116 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 RD3LP0DJH9 198 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 ADMP35318 185 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 SELENOTP62341 195 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 S100A7AQ86SG5 101 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 OR9G4Q8NGQ1 327 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 MARC2Q969Z3 335 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 HSPB11Q9Y547 144 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 COL7A1Q02388 2944 aa15.39■□□□□ 0.05
USP53-208ENST00000514305 TOMM40O96008 361 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 TIGITQ495A1 244 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 C9orf66Q5T8R8 295 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 AKAP14Q86UN6 197 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 OR5C1Q8NGR4 320 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 NARS2Q96I59 477 aaKnown RBP15.38■□□□□ 0.05
USP53-208ENST00000514305 B9D2Q9BPU9 175 aa15.38■□□□□ 0.05
USP53-208ENST00000514305 MRPL36Q9P0J6 103 aaKnown RBP15.38■□□□□ 0.05
USP53-208ENST00000514305 K7EMT4 169 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 MPDU1O75352 247 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 IFNA5P01569 189 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 AP2S1P53680 142 aaPredicted RBP15.37■□□□□ 0.05
USP53-208ENST00000514305 NHLH2Q02577 135 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 ARL16Q0P5N6 197 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 BPIFCQ8NFQ6 507 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 OR51G1Q8NGK1 321 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 TMEM190Q8WZ59 177 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 AQP10Q96PS8 301 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 C20orf24Q9BUV8 137 aa15.37■□□□□ 0.05
USP53-208ENST00000514305 PUS1Q9Y606 427 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP53-208ENST00000514305 IGHV3-35A0A0C4DH35 117 aa15.36■□□□□ 0.05
USP53-208ENST00000514305 IGKV1-17P01599 117 aa15.36■□□□□ 0.05
USP53-208ENST00000514305 HAPLN4Q86UW8 402 aa15.36■□□□□ 0.05
USP53-208ENST00000514305 DAZ1Q9NQZ3 744 aaKnown RBP15.36■□□□□ 0.05
USP53-208ENST00000514305 SIGLEC8Q9NYZ4 499 aa15.36■□□□□ 0.05
USP53-208ENST00000514305 A8MWP6 167 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 SEC14L6B5MCN3 397 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 VWC2Q2TAL6 325 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 TOMM20LQ6UXN7 152 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 TCTE3Q8IZS6 198 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 SCGB1C1Q8TD33 95 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 TMEM231Q9H6L2 316 aa15.35■□□□□ 0.05
USP53-208ENST00000514305 MRPL27Q9P0M9 148 aaKnown RBP15.35■□□□□ 0.05
USP53-208ENST00000514305 A0A1W2PS18 150 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 PSG1P11464 419 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 ZNF266Q14584 549 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 CYP2G1PQ6ZSU1 146 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 ZNF709Q8N972 641 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 METTL26Q96S19 204 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 ATP5SQ99766 215 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 KCNIP2Q9NS61 270 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 TNFSF18Q9UNG2 199 aa15.34■□□□□ 0.05
USP53-208ENST00000514305 UBE2L5PA0A1B0GUS4 154 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 HMSDA8MTL9 139 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 C17orf112F2Z3M2 114 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 SAP30O75446 220 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 NPPCP23582 126 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 CLINT1Q14677 625 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 Q5BKY6 102 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 PXDC1Q5TGL8 231 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 DYNLRB2Q8TF09 96 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 RNF24Q9Y225 148 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 WDR83OSQ9Y284 106 aa15.33■□□□□ 0.04
USP53-208ENST00000514305 IGKV1D-37A0A075B6S9 117 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 TAAR5O14804 337 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 IL4P05112 153 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 CAMLGP49069 296 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 OR2F1Q13607 317 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 BTNL8Q6UX41 500 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 ST6GAL2Q96JF0 529 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 MFFQ9GZY8 342 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 TECRQ9NZ01 308 aaKnown RBP15.32■□□□□ 0.04
USP53-208ENST00000514305 RABAC1Q9UI14 185 aa15.32■□□□□ 0.04
USP53-208ENST00000514305 C2orf70A6NJV1 201 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 AGPAT2O15120 278 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 ARPC5O15511 151 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 CD5P06127 495 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 FGF7P21781 194 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 ZNF90Q03938 601 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 UNQ9165/PRO28630Q6UXU0 137 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 Q6ZRG5 221 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 RNF125Q96EQ8 232 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 GRAMD2BQ96HH9 432 aa15.31■□□□□ 0.04
USP53-208ENST00000514305 LSM4Q9Y4Z0 139 aaKnown RBP15.31■□□□□ 0.04
USP53-208ENST00000514305 IGKV1OR2-108A0A075B7D4 117 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 BORCS7-ASMTA0A0B4J1R7 106 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 A0A0D9SG52 128 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 CSN3P07498 182 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 HNRNPCP07910 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP53-208ENST00000514305 FOLR2P14207 255 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 CBLN1P23435 193 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 OR2K2Q8NGT1 345 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 HYLS1Q96M11 299 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 WWC2-AS2Q96NR7 200 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 PBDC1Q9BVG4 233 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 PARD6GQ9BYG4 376 aaPredicted RBP15.3■□□□□ 0.04
USP53-208ENST00000514305 SMIM3Q9BZL3 60 aa15.3■□□□□ 0.04
USP53-208ENST00000514305 SLC45A2Q9UMX9 530 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms