RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 TECRQ9NZ01 308 aaKnown RBP7.75□□□□□ -1.17
TPM3-221ENST00000513769 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 FUT9Q9Y231 359 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 DMRT1Q9Y5R6 373 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 ARL2-SNX15V9GYD0 113 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.75□□□□□ -1.17
TPM3-221ENST00000513769 FAM223BA6NKX1 122 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 ATP6V0E1O15342 81 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 OR5G3P0C626 314 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 IGLC1P0CG04 106 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 RD3LP0DJH9 198 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 HNF1AP20823 631 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 PPIFP30405 207 aaKnown RBP7.74□□□□□ -1.17
TPM3-221ENST00000513769 ELLP55199 621 aaPredicted RBP7.74□□□□□ -1.17
TPM3-221ENST00000513769 RPL15P61313 204 aaKnown RBP7.74□□□□□ -1.17
TPM3-221ENST00000513769 CCL20P78556 96 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 FAM78BQ5VT40 261 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 LCN15Q6UWW0 184 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 FAM223AQ8IWN6 122 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 OR51G1Q8NGK1 321 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 Q8WTZ3 238 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 HSPB9Q9BQS6 159 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 FAM103A1Q9BTL3 118 aaKnown RBP7.74□□□□□ -1.17
TPM3-221ENST00000513769 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 TREM1Q9NP99 234 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 TMEM167BQ9NRX6 74 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 C21orf62Q9NYP8 219 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 FBXL7Q9UJT9 491 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 VPREB3Q9UKI3 123 aa7.74□□□□□ -1.17
TPM3-221ENST00000513769 MAP1AP78559 2803 aaPredicted RBP7.74□□□□□ -1.17
TPM3-221ENST00000513769 A0A0G2JLM5 398 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 PSMB11A5LHX3 300 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 GNG7O60262 68 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 HYPMO75409 117 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 TOMM40O96008 361 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 C8orf88P0DMB2 117 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 FAM122CQ6P4D5 195 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 Q71RC1 249 aaPredicted RBP7.73□□□□□ -1.17
TPM3-221ENST00000513769 BCL6BQ8N143 479 aaPredicted RBP7.73□□□□□ -1.17
TPM3-221ENST00000513769 CIARTQ8N365 385 aaPredicted RBP7.73□□□□□ -1.17
TPM3-221ENST00000513769 TMEM37Q8WXS4 190 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 SEPSECSQ9HD40 501 aaKnown RBP7.73□□□□□ -1.17
TPM3-221ENST00000513769 CARHSP1Q9Y2V2 147 aaKnown RBP7.73□□□□□ -1.17
TPM3-221ENST00000513769 PLXNB1O43157 2135 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 CR1P17927 2039 aa7.73□□□□□ -1.17
TPM3-221ENST00000513769 ACANP16112 2415 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 LINC01548A6NM66 108 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 F8W036 122 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 TMEM250H0YL14 139 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 CLDN34H7C241 214 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 NDUFB8O95169 186 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 OR2C1O95371 312 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 IGKV1-17P01599 117 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 APELAP0DMC3 54 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 PSG1P11464 419 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 RAB9AP51151 201 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 BLCAPP62952 87 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 NDPQ00604 133 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 ZNF90Q03938 601 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 ATP5G2Q06055 141 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 TMEM219Q86XT9 240 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 SVBPQ8N300 66 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 EEF1AKMT3Q96AZ1 226 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 NPFFR1Q9GZQ6 430 aa7.72□□□□□ -1.17
TPM3-221ENST00000513769 MRPL27Q9P0M9 148 aaKnown RBP7.72□□□□□ -1.17
TPM3-221ENST00000513769 LOC102723971A0A1B0GUV8 181 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 WI2-2373I1.2A0A1W2PRP0 233 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 NUPL2O15504 423 aaKnown RBP7.71□□□□□ -1.18
TPM3-221ENST00000513769 PDE6DO43924 150 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 COX7A2P2O60397 106 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 IGHV4-59P01825 116 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 CTSGP08311 255 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 BCL2P10415 239 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 SRSF3P84103 164 aaKnown RBP7.71□□□□□ -1.18
TPM3-221ENST00000513769 ZNF124Q15973 351 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 LY6EQ16553 131 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 C15orf32Q32M92 178 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 TOR2AQ5JU69 321 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 SOHLH1Q5JUK2 328 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 PATE2Q6UY27 113 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 Q8N2B8 174 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 SMR3AQ99954 134 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 RARRES2Q99969 163 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 ZNF355PQ9NSJ1 428 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 MRPL36Q9P0J6 103 aaKnown RBP7.71□□□□□ -1.18
TPM3-221ENST00000513769 GNG13Q9P2W3 67 aa7.71□□□□□ -1.18
TPM3-221ENST00000513769 SOX21Q9Y651 276 aaPredicted RBP7.71□□□□□ -1.18
TPM3-221ENST00000513769 A0A1W2PRE2 83 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 G3V318 75 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 SMAD7O15105 426 aaKnown RBP7.7□□□□□ -1.18
TPM3-221ENST00000513769 OR2J3O76001 311 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 SNAPINO95295 136 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 IGHG4P01861 327 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 CLEC3BP05452 202 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms