RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	PSG1	P11464	419 aa		12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	NUP62	P37198	522 aa	Predicted RBP	12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	STXBP6	Q8NFX7	210 aa		12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	CIB3	Q96Q77	187 aa	Predicted RBP	12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	FRAS1	Q86XX4	4008 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	BUB3	O43684	328 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	GAMT	Q14353	236 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	TMEM41B	Q5BJD5	291 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	OR8G2P	Q6IF36	304 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	OR51G1	Q8NGK1	321 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	RARRES2	Q99969	163 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	DNAH10	Q8IVF4	4471 aa		12.29	□□□□□ -0.44
MATR3-222	ENST00000513678	IGKV1D-37	A0A075B6S9	117 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	NDUFB6	O95139	128 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	CA1	P00915	261 aa	Predicted RBP	12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	RAB11A	P62491	216 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	BAK1	Q16611	211 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	LEMD1	Q68G75	181 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	TRPT1	Q86TN4	253 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	STH	Q8IWL8	128 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	RNF125	Q96EQ8	232 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	SLC35E1	Q96K37	410 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	PFDN2	Q9UHV9	154 aa		12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	KLK5	Q9Y337	293 aa	Predicted RBP	12.28	□□□□□ -0.44
MATR3-222	ENST00000513678	FABP1	P07148	127 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	SPP1	P10451	314 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	DHRS2	Q13268	280 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	TRIQK	Q629K1	86 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	MORN3	Q6PF18	240 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	OR11H2	Q8NH07	326 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	SDHC	Q99643	169 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	C7orf50	Q9BRJ6	194 aa	Known RBP	12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	NRN1	Q9NPD7	142 aa		12.27	□□□□□ -0.45
MATR3-222	ENST00000513678	C9orf170	A2RU37	121 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	ZFP92	A6NM28	416 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	SYNGR2	O43760	224 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	LY6G6C	O95867	125 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	GIG44	P09565	113 aa	Predicted RBP	12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	ZNF688	P0C7X2	276 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	INPP1	P49441	399 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	RPP30	P78346	268 aa	Known RBP	12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	GGNBP1	Q5YKI7	109 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	THAP8	Q8NA92	274 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	TRGV9	Q99603	122 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	NDUFA13	Q9P0J0	144 aa		12.26	□□□□□ -0.45
MATR3-222	ENST00000513678	PRSS46	E5RG02	174 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	HOXB5	P09067	269 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	IAPP	P10997	89 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	CNPY1	Q3B7I2	92 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	C1orf194	Q5T5A4	169 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	SIGLEC15	Q6ZMC9	328 aa		12.25	□□□□□ -0.45
MATR3-222	ENST00000513678	IGKV1OR2-108	A0A075B7D4	117 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	CENPX	A8MT69	81 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	SNRPGP15	A8MWD9	76 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	AGRN	O00468	2067 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	CFD	P00746	253 aa	Predicted RBP	12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	SNRPD3	P62318	126 aa	Known RBP	12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	ID3	Q02535	119 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	ZNF90	Q03938	601 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	MFF	Q9GZY8	342 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	FBXL17	Q9UF56	701 aa		12.24	□□□□□ -0.45
MATR3-222	ENST00000513678	DNAH6	Q9C0G6	4158 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	OR4E1	P0C645	316 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	IL7	P13232	177 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	BTC	P35070	178 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	NANOS2	P60321	138 aa	Known RBP	12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	PSMG4	Q5JS54	123 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678		Q8NAQ8	132 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	COQ8A	Q8NI60	647 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	C11orf45	Q8TAV5	145 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	RAB40C	Q96S21	281 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	MAGT1	Q9H0U3	335 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	SLC45A2	Q9UMX9	530 aa		12.23	□□□□□ -0.45
MATR3-222	ENST00000513678	KNCN	A6PVL3	124 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	WRB	O00258	174 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	C4BPB	P20851	252 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	ACTL10	Q5JWF8	245 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	PBDC1	Q9BVG4	233 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	FLVCR2	Q9UPI3	526 aa		12.22	□□□□□ -0.45
MATR3-222	ENST00000513678	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	ADAP1	O75689	374 aa		12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	NKX2-1	P43699	371 aa	Predicted RBP	12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	CSNK1G2-AS1	Q8NCQ2	148 aa		12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	OR4D5	Q8NGN0	318 aa		12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	STRAP	Q9Y3F4	350 aa	Known RBP	12.21	□□□□□ -0.45
MATR3-222	ENST00000513678	DEFB4A	O15263	64 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	IFNA21	P01568	189 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	MIF	P14174	115 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	LYZ	P61626	148 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	SAMD13	Q5VXD3	122 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	LGALS9C	Q6DKI2	356 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678	HRH4	Q9H3N8	390 aa		12.2	□□□□□ -0.46
MATR3-222	ENST00000513678		H3BMM0	161 aa		12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	SOCS3	O14543	225 aa		12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	HLA-DRB4	P13762	266 aa		12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	NUTF2	P61970	127 aa	Known RBP	12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	SPANXN5	Q5MJ07	72 aa		12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	MITD1	Q8WV92	249 aa		12.19	□□□□□ -0.46
MATR3-222	ENST00000513678	SMIM8	Q96KF7	97 aa		12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms