RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MYO9AB2RTY4 2548 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 WDFY4Q6ZS81 3184 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 GVINP1Q7Z2Y8 2422 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 WNK2Q9Y3S1 2297 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 ZGRF1Q86YA3 2104 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 KIF13BQ9NQT8 1826 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 CSMD1Q96PZ7 3565 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 VPS13DQ5THJ4 4388 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 KALRNO60229 2985 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 FANCMQ8IYD8 2048 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 LRRK2Q5S007 2527 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 IGHV1-58A0A0C4DH39 117 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TRPC5OSA6NMA1 111 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 EVPLLA8MZ36 301 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 K7EIL1 84 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 PFDN6O15212 129 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SSNA1O43805 119 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 OR2B3O76000 313 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 AHSA1O95433 338 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 KRT75O95678 551 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 ZNF682O95780 498 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPINK1P00995 79 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 IGKV1-5P01602 117 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TYMSP04818 313 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 CD2P06729 351 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TPM1P09493 284 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPRR2EP22531 72 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPRR2DP22532 72 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPRR2BP35325 72 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPRR2AP35326 72 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 FXYD6P3P58550 94 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 CDKL4Q5MAI5 379 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 BRMS1LQ5PSV4 323 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 C1orf195Q5TG92 126 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 HAGHLQ6PII5 290 aaPredicted RBP-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 HIST3H2BBQ8N257 126 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 PXT1Q8NFP0 134 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 OR10J5Q8NHC4 309 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TERB2Q8NHR7 220 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 PSMF1Q92530 271 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 MAP1LC3AQ9H492 121 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 PSTPIP2Q9H939 334 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TREM1Q9NP99 234 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPANXB1Q9NS25 103 aaPredicted RBP-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 ERGIC3Q9Y282 383 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 V9GYY5 206 aaPredicted RBP-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 EP400Q96L91 3159 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 CMYA5Q8N3K9 4069 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TAF1LQ8IZX4 1826 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TLN2Q9Y4G6 2542 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 SPTBN2O15020 2390 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 MYO3BQ8WXR4 1341 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 TOPBP1Q92547 1522 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 AHCTF1Q8WYP5 2266 aa-0.18□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH11Q96DT5 4516 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 LOC285556D6RIA3 1793 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 MTORP42345 2549 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 MYH10P35580 1976 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH8Q96JB1 4490 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TRAV9-1A0A075B6T8 112 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TRAV23DV6A0A075B6W5 121 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 IGLV3-32A0A0A0MS00 114 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TRBV30A0A0K0K1B3 111 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 F5H768 121 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 H3BRM9 83 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 NUPR1O60356 82 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 NDUFS6O75380 124 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 UCHL3P15374 230 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 RPL12P30050 165 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 MARCKSL1P49006 195 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 BLVRAP53004 296 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 DEFA1P59665 94 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 ESRGQ1W209 222 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 Q6ZS49 121 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 Q86TA4 180 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 CNPY4Q8N129 248 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 DEFB125Q8N687 156 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 OR51D1Q8NGF3 324 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 OR52L1Q8NGH7 329 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 OR13D1Q8NGV5 346 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 OR10AC1Q8NH08 325 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TMEM254Q8TBM7 123 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TEX47Q8TBZ9 253 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 MRPL30Q8TCC3 161 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 C7orf50Q9BRJ6 194 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 WFDC10AQ9H1F0 79 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 TMEM138Q9NPI0 162 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 OSTCQ9NRP0 149 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 NHP2Q9NX24 153 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 CMTM6Q9NX76 183 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 ORMDL1Q9P0S3 153 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 HS3ST2Q9Y278 367 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 UTP11Q9Y3A2 253 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 CSMD2Q7Z408 3487 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 SPENQ96T58 3664 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH9Q9NYC9 4486 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 UTP20O75691 2785 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 AKAP9Q99996 3911 aa-0.19□□□□□ -2.44
PDGFC-208ENST00000512711 LRBAP50851 2863 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms