RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 OR11H2Q8NH07 326 aa16.81■□□□□ 0.28
SNF8-209ENST00000510558 ALMS1Q8TCU4 4167 aa16.81■□□□□ 0.28
SNF8-209ENST00000510558 ZFP92A6NM28 416 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 MED6O75586 246 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 HOXB5P09067 269 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 BAK1Q16611 211 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 TRIQKQ629K1 86 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 TRPT1Q86TN4 253 aaKnown RBP16.8■□□□□ 0.28
SNF8-209ENST00000510558 RNF125Q96EQ8 232 aa16.8■□□□□ 0.28
SNF8-209ENST00000510558 PLECQ15149 4684 aaKnown RBP16.8■□□□□ 0.28
SNF8-209ENST00000510558 IGKV1D-37A0A075B6S9 117 aa16.79■□□□□ 0.28
SNF8-209ENST00000510558 KNCNA6PVL3 124 aa16.79■□□□□ 0.28
SNF8-209ENST00000510558 BUB3O43684 328 aa16.79■□□□□ 0.28
SNF8-209ENST00000510558 UBE2MP61081 183 aaKnown RBP16.79■□□□□ 0.28
SNF8-209ENST00000510558 RAB11AP62491 216 aa16.79■□□□□ 0.28
SNF8-209ENST00000510558 CEMP1Q6PRD7 247 aaPredicted RBP16.79■□□□□ 0.28
SNF8-209ENST00000510558 PAIP2BQ9ULR5 123 aaKnown RBP16.79■□□□□ 0.28
SNF8-209ENST00000510558 NAP1L6A6NFF2 107 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 ZNF90Q03938 601 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 GGNBP1Q5YKI7 109 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 SIGLEC15Q6ZMC9 328 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 CIB3Q96Q77 187 aaPredicted RBP16.78■□□□□ 0.28
SNF8-209ENST00000510558 PBDC1Q9BVG4 233 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 MAGT1Q9H0U3 335 aa16.78■□□□□ 0.28
SNF8-209ENST00000510558 SYNGR2O43760 224 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 NDUFB6O95139 128 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 PSMG4Q5JS54 123 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 ACTL10Q5JWF8 245 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 OR8G2PQ6IF36 304 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 C11orf68Q9H3H3 251 aaKnown RBP16.77■□□□□ 0.28
SNF8-209ENST00000510558 NRN1Q9NPD7 142 aa16.77■□□□□ 0.28
SNF8-209ENST00000510558 HYDINQ4G0P3 5121 aa16.77■□□□□ 0.27
SNF8-209ENST00000510558 C9orf170A2RU37 121 aa16.76■□□□□ 0.27
SNF8-209ENST00000510558 GIG44P09565 113 aaPredicted RBP16.76■□□□□ 0.27
SNF8-209ENST00000510558 SPP1P10451 314 aa16.76■□□□□ 0.27
SNF8-209ENST00000510558 NUP62P37198 522 aaPredicted RBP16.76■□□□□ 0.27
SNF8-209ENST00000510558 MORN3Q6PF18 240 aaPredicted RBP16.76■□□□□ 0.27
SNF8-209ENST00000510558 SDHCQ99643 169 aaPredicted RBP16.76■□□□□ 0.27
SNF8-209ENST00000510558 LINC00854A0A1B0GVQ3 168 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 WRBO00258 174 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 FABP1P07148 127 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 C4BPBP20851 252 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 LYZP61626 148 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 SNRPD3P62318 126 aaKnown RBP16.75■□□□□ 0.27
SNF8-209ENST00000510558 RPP30P78346 268 aaKnown RBP16.75■□□□□ 0.27
SNF8-209ENST00000510558 TMEM41BQ5BJD5 291 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 LINC00476Q8WZB0 136 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 RAB40CQ96S21 281 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 TRGV9Q99603 122 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 SEPSECSQ9HD40 501 aaKnown RBP16.75■□□□□ 0.27
SNF8-209ENST00000510558 PFDN2Q9UHV9 154 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 FLVCR2Q9UPI3 526 aa16.75■□□□□ 0.27
SNF8-209ENST00000510558 KLK5Q9Y337 293 aaPredicted RBP16.75■□□□□ 0.27
SNF8-209ENST00000510558 ADAP1O75689 374 aa16.74■□□□□ 0.27
SNF8-209ENST00000510558 OR2F1Q13607 317 aa16.74■□□□□ 0.27
SNF8-209ENST00000510558 PHLDA1Q8WV24 401 aaPredicted RBP16.74■□□□□ 0.27
SNF8-209ENST00000510558 IGKV1OR2-108A0A075B7D4 117 aa16.73■□□□□ 0.27
SNF8-209ENST00000510558 DEFB4AO15263 64 aa16.73■□□□□ 0.27
SNF8-209ENST00000510558 THAP8Q8NA92 274 aa16.73■□□□□ 0.27
SNF8-209ENST00000510558 SNRPGP15A8MWD9 76 aa16.72■□□□□ 0.27
SNF8-209ENST00000510558 PRSS46E5RG02 174 aa16.72■□□□□ 0.27
SNF8-209ENST00000510558 SPANXN5Q5MJ07 72 aa16.72■□□□□ 0.27
SNF8-209ENST00000510558 COQ8AQ8NI60 647 aa16.72■□□□□ 0.27
SNF8-209ENST00000510558 C11orf45Q8TAV5 145 aa16.72■□□□□ 0.27
SNF8-209ENST00000510558 CENPXA8MT69 81 aa16.71■□□□□ 0.27
SNF8-209ENST00000510558 H3BP45 60 aa16.71■□□□□ 0.27
SNF8-209ENST00000510558 OR4E1P0C645 316 aa16.71■□□□□ 0.27
SNF8-209ENST00000510558 BTCP35070 178 aa16.71■□□□□ 0.27
SNF8-209ENST00000510558 NANOS2P60321 138 aaKnown RBP16.71■□□□□ 0.27
SNF8-209ENST00000510558 C7orf50Q9BRJ6 194 aaKnown RBP16.71■□□□□ 0.27
SNF8-209ENST00000510558 MFFQ9GZY8 342 aa16.71■□□□□ 0.27
SNF8-209ENST00000510558 LY6G6CO95867 125 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 IL7P13232 177 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 ID3Q02535 119 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 C1orf194Q5T5A4 169 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 Q8NAQ8 132 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 FBXL17Q9UF56 701 aa16.7■□□□□ 0.26
SNF8-209ENST00000510558 STRAPQ9Y3F4 350 aaKnown RBP16.7■□□□□ 0.26
SNF8-209ENST00000510558 IFNA21P01568 189 aa16.69■□□□□ 0.26
SNF8-209ENST00000510558 ANXA7P20073 488 aaKnown RBP16.69■□□□□ 0.26
SNF8-209ENST00000510558 POLR2GP62487 172 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNF8-209ENST00000510558 PPP1R14BQ96C90 147 aa16.69■□□□□ 0.26
SNF8-209ENST00000510558 CLEC5AQ9NY25 188 aa16.69■□□□□ 0.26
SNF8-209ENST00000510558 IGHV4-28A0A0C4DH34 117 aa16.68■□□□□ 0.26
SNF8-209ENST00000510558 ZNF705EA8MWA4 302 aaPredicted RBP16.68■□□□□ 0.26
SNF8-209ENST00000510558 NKX2-1P43699 371 aaPredicted RBP16.68■□□□□ 0.26
SNF8-209ENST00000510558 C4orf46Q504U0 113 aa16.68■□□□□ 0.26
SNF8-209ENST00000510558 CSNK1G2-AS1Q8NCQ2 148 aa16.68■□□□□ 0.26
SNF8-209ENST00000510558 OR4D5Q8NGN0 318 aa16.68■□□□□ 0.26
SNF8-209ENST00000510558 WDR12Q9GZL7 423 aaKnown RBP16.68■□□□□ 0.26
SNF8-209ENST00000510558 H3BMM0 161 aa16.67■□□□□ 0.26
SNF8-209ENST00000510558 CFDP00746 253 aaPredicted RBP16.67■□□□□ 0.26
SNF8-209ENST00000510558 MIFP14174 115 aa16.67■□□□□ 0.26
SNF8-209ENST00000510558 AKR1C1Q04828 323 aa16.67■□□□□ 0.26
SNF8-209ENST00000510558 ACOT7LQ6ZUV0 252 aa16.67■□□□□ 0.26
SNF8-209ENST00000510558 NDUFA13Q9P0J0 144 aa16.67■□□□□ 0.26
SNF8-209ENST00000510558 RBMY1A1P0DJD3 496 aaKnown RBP16.66■□□□□ 0.26
SNF8-209ENST00000510558 RBMY1CP0DJD4 496 aa16.66■□□□□ 0.26
SNF8-209ENST00000510558 HLA-DRB4P13762 266 aa16.66■□□□□ 0.26
SNF8-209ENST00000510558 NUTF2P61970 127 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms