RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CORTO00230 105 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 SLC17A3O00476 420 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 SELENOTP62341 195 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
PHF3-209ENST00000509330 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 K7EN84 100 aa11.75□□□□□ -0.53
PHF3-209ENST00000509330 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 CXorf65A6NEN9 183 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 HYPMO75409 117 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 CENPWQ5EE01 88 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 Q8N9W7 124 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 TRGV9Q99603 122 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 MRPL32Q9BYC8 188 aaKnown RBP11.74□□□□□ -0.53
PHF3-209ENST00000509330 IGKV1-17P01599 117 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 FABP9Q0Z7S8 132 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 LY6EQ16553 131 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 MALSU1Q96EH3 234 aa11.74□□□□□ -0.53
PHF3-209ENST00000509330 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 HELTA6NFD8 242 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
PHF3-209ENST00000509330 Q56UQ5 140 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 Q8N6K4 173 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 G3V318 75 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 RD3LP0DJH9 198 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 C9orf152Q5JTZ5 239 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 C19orf24Q9BVV8 132 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 GNG7O60262 68 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 NDUFB8O95169 186 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 NDUFA6P56556 154 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 PVRIGQ6DKI7 326 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 FXYD5Q96DB9 178 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
PHF3-209ENST00000509330 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
PHF3-209ENST00000509330 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 IL4P05112 153 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 S100PP25815 95 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 BRS3P32247 399 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 GNG4P50150 75 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
PHF3-209ENST00000509330 C7orf69Q9H7B7 122 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 PFN1P07737 140 aaKnown RBP11.72□□□□□ -0.53
PHF3-209ENST00000509330 COX6B1P14854 86 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
PHF3-209ENST00000509330 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.53
PHF3-209ENST00000509330 SPINK4O60575 86 aa11.71□□□□□ -0.53
PHF3-209ENST00000509330 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
PHF3-209ENST00000509330 FRZBQ92765 325 aa11.71□□□□□ -0.53
PHF3-209ENST00000509330 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
PHF3-209ENST00000509330 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
PHF3-209ENST00000509330 DOPEY2Q9Y3R5 2298 aa11.71□□□□□ -0.53
PHF3-209ENST00000509330 SGMS2Q8NHU3 365 aa11.71□□□□□ -0.54
PHF3-209ENST00000509330 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.54
PHF3-209ENST00000509330 CCDC168Q8NDH2 2452 aa11.71□□□□□ -0.54
PHF3-209ENST00000509330 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 RNF2Q99496 336 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 ASCL2Q99929 193 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 PGPA6NDG6 321 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 PAX8Q06710 450 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 PRR27Q6MZM9 219 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 TEX38Q6PEX7 206 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 SLC25A39Q9BZJ4 359 aaPredicted RBP11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 IGLV11-55A0A075B6I3 123 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 SLC35B1P78383 322 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
PHF3-209ENST00000509330 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 ANAPC16Q96DE5 110 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 PRELID1Q9Y255 219 aa11.7□□□□□ -0.54
PHF3-209ENST00000509330 A0A1W2PRE2 83 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 AVPP01185 164 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 FCGR2BP31994 310 aaPredicted RBP11.69□□□□□ -0.54
PHF3-209ENST00000509330 TCL1AP56279 114 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 EBI3Q14213 229 aa11.69□□□□□ -0.54
PHF3-209ENST00000509330 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms