RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
CXCL1-202ENST00000509101 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
CXCL1-202ENST00000509101 MTFP1Q9UDX5 166 aa11.33□□□□□ -0.6
CXCL1-202ENST00000509101 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
CXCL1-202ENST00000509101 C3orf85A0A1B0GTC6 90 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 BUB3O43684 328 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 GSTZ1O43708 216 aaPredicted RBP11.32□□□□□ -0.6
CXCL1-202ENST00000509101 CD3DP04234 171 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 HTR2BP41595 481 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 ZNF709Q8N972 641 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 OR4D10Q8NGI6 311 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
CXCL1-202ENST00000509101 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
CXCL1-202ENST00000509101 DIRAS2Q96HU8 199 aa11.32□□□□□ -0.6
CXCL1-202ENST00000509101 YTHDF2Q9Y5A9 579 aaKnown RBP11.32□□□□□ -0.6
CXCL1-202ENST00000509101 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 SLC25A4P12235 298 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 DAD1P61803 113 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 OXA1LQ15070 435 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 SP6Q3SY56 376 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 LINC00052Q96N35 136 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
CXCL1-202ENST00000509101 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
CXCL1-202ENST00000509101 HERC1Q15751 4861 aa11.31□□□□□ -0.6
CXCL1-202ENST00000509101 GABARAPH6UMI1 98 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 HBE1P02100 147 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 TNFSF8P32971 234 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 SPCS3P61009 180 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 IL18Q14116 193 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 FOXI2Q6ZQN5 318 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 ACY3Q96HD9 319 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 C7orf50Q9BRJ6 194 aaKnown RBP11.3□□□□□ -0.6
CXCL1-202ENST00000509101 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
CXCL1-202ENST00000509101 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
CXCL1-202ENST00000509101 NXPH3O95157 252 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 TOMM40O96008 361 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 FAM3BP58499 235 aaPredicted RBP11.29□□□□□ -0.6
CXCL1-202ENST00000509101 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
CXCL1-202ENST00000509101 FAAP20Q6NZ36 180 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 LHFPL1Q86WI0 220 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 Q8N1X5 172 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 TMEM229BQ8NBD8 167 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 SLC24A4Q8NFF2 622 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CXCL1-202ENST00000509101 C15orf40Q8WUR7 153 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 SOSTQ9BQB4 213 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 COPZ2Q9P299 210 aa11.29□□□□□ -0.6
CXCL1-202ENST00000509101 RSL24D1Q9UHA3 163 aaKnown RBP11.29□□□□□ -0.6
CXCL1-202ENST00000509101 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 RD3LP0DJH9 198 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 UCP1P25874 307 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 SMIM4Q8WVI0 70 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 PBDC1Q9BVG4 233 aa11.28□□□□□ -0.6
CXCL1-202ENST00000509101 CEBPZOSA8MTT3 80 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 F6UB75 175 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 CTDSPLO15194 276 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 RAB3DO95716 219 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 PSG1P11464 419 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.61
CXCL1-202ENST00000509101 ID1P41134 155 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 PSMB3P49720 205 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 TAS2R19P59542 299 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 MRPS10P82664 201 aaKnown RBP11.27□□□□□ -0.61
CXCL1-202ENST00000509101 PSG9Q00887 426 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 ZNF79Q15937 498 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 AARDQ4LEZ3 155 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 STEAP1BQ6NZ63 245 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 OR52E5Q8NH55 327 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 RNF125Q96EQ8 232 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 CACNG5Q9UF02 275 aa11.27□□□□□ -0.61
CXCL1-202ENST00000509101 FABP12A6NFH5 140 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 ARRDC1Q8N5I2 433 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 ZNRF2Q8NHG8 242 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 GPR146Q96CH1 333 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 MAGT1Q9H0U3 335 aa11.26□□□□□ -0.61
CXCL1-202ENST00000509101 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.26□□□□□ -0.61
CXCL1-202ENST00000509101 SOCS3O14543 225 aa11.25□□□□□ -0.61
CXCL1-202ENST00000509101 TBPP20226 339 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms