RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 PSMG4Q5JS54 123 aa16.1■□□□□ 0.17
PACRGL-220ENST00000508952 ACTL10Q5JWF8 245 aa16.1■□□□□ 0.17
PACRGL-220ENST00000508952 PHLDA1Q8WV24 401 aaPredicted RBP16.1■□□□□ 0.17
PACRGL-220ENST00000508952 SLC35E1Q96K37 410 aa16.1■□□□□ 0.17
PACRGL-220ENST00000508952 PBDC1Q9BVG4 233 aa16.1■□□□□ 0.17
PACRGL-220ENST00000508952 C11orf68Q9H3H3 251 aaKnown RBP16.1■□□□□ 0.17
PACRGL-220ENST00000508952 IGKV1D-37A0A075B6S9 117 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 PIGBOS1A0A0B4J2F0 54 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 ZFP92A6NM28 416 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 SFT2D2O95562 160 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 C4BPBP20851 252 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 GPX4P36969 197 aaPredicted RBP16.09■□□□□ 0.17
PACRGL-220ENST00000508952 AP2S1P53680 142 aaPredicted RBP16.09■□□□□ 0.17
PACRGL-220ENST00000508952 ZNF90Q03938 601 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 DEDD2Q8WXF8 326 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 RNF125Q96EQ8 232 aa16.09■□□□□ 0.17
PACRGL-220ENST00000508952 KLK5Q9Y337 293 aaPredicted RBP16.09■□□□□ 0.17
PACRGL-220ENST00000508952 FAM90A26D6RGX4 464 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
PACRGL-220ENST00000508952 SPANXN2Q5MJ10 180 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 SIGLEC15Q6ZMC9 328 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 CENPSQ8N2Z9 138 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 C11orf45Q8TAV5 145 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 SRRQ9GZT4 340 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 MAGT1Q9H0U3 335 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 FBXL17Q9UF56 701 aa16.08■□□□□ 0.16
PACRGL-220ENST00000508952 PAIP2BQ9ULR5 123 aaKnown RBP16.08■□□□□ 0.16
PACRGL-220ENST00000508952 HOXB5P09067 269 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 SPP1P10451 314 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 SLC25A6P12236 298 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 MORN3Q6PF18 240 aaPredicted RBP16.07■□□□□ 0.16
PACRGL-220ENST00000508952 RAB40CQ96S21 281 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 NRN1Q9NPD7 142 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 TMED3Q9Y3Q3 217 aa16.07■□□□□ 0.16
PACRGL-220ENST00000508952 ZNF701M0R085 212 aaPredicted RBP16.06■□□□□ 0.16
PACRGL-220ENST00000508952 RAB11AP62491 216 aa16.06■□□□□ 0.16
PACRGL-220ENST00000508952 Q8NAQ8 132 aa16.06■□□□□ 0.16
PACRGL-220ENST00000508952 CLEC5AQ9NY25 188 aa16.06■□□□□ 0.16
PACRGL-220ENST00000508952 LYZP61626 148 aa16.05■□□□□ 0.16
PACRGL-220ENST00000508952 OR2F1Q13607 317 aa16.05■□□□□ 0.16
PACRGL-220ENST00000508952 BAK1Q16611 211 aa16.05■□□□□ 0.16
PACRGL-220ENST00000508952 GGNBP1Q5YKI7 109 aa16.05■□□□□ 0.16
PACRGL-220ENST00000508952 WRBO00258 174 aa16.04■□□□□ 0.16
PACRGL-220ENST00000508952 MED6O75586 246 aa16.04■□□□□ 0.16
PACRGL-220ENST00000508952 SNRPD3P62318 126 aaKnown RBP16.04■□□□□ 0.16
PACRGL-220ENST00000508952 TMEM41BQ5BJD5 291 aa16.04■□□□□ 0.16
PACRGL-220ENST00000508952 OR8G2PQ6IF36 304 aa16.04■□□□□ 0.16
PACRGL-220ENST00000508952 MFFQ9GZY8 342 aa16.04■□□□□ 0.16
PACRGL-220ENST00000508952 IGKV1OR2-108A0A075B7D4 117 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 IGHV4-28A0A0C4DH34 117 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 SYNGR2O43760 224 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 INPP1P49441 399 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 TRIQKQ629K1 86 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 KMT2AQ03164 3969 aa16.03■□□□□ 0.16
PACRGL-220ENST00000508952 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 FABP1P07148 127 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 RBMY1A1P0DJD3 496 aaKnown RBP16.02■□□□□ 0.16
PACRGL-220ENST00000508952 RBMY1CP0DJD4 496 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 NUP62P37198 522 aaPredicted RBP16.02■□□□□ 0.16
PACRGL-220ENST00000508952 RBMY1FQ15415 496 aaKnown RBP16.02■□□□□ 0.16
PACRGL-220ENST00000508952 GSG1LQ6UXU4 331 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 CIB3Q96Q77 187 aaPredicted RBP16.02■□□□□ 0.16
PACRGL-220ENST00000508952 TRGV9Q99603 122 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 FLVCR2Q9UPI3 526 aa16.02■□□□□ 0.16
PACRGL-220ENST00000508952 C9orf170A2RU37 121 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 ZNF705EA8MWA4 302 aaPredicted RBP16.01■□□□□ 0.15
PACRGL-220ENST00000508952 PRSS46E5RG02 174 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 H3BP45 60 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 ADAP1O75689 374 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 NDUFB6O95139 128 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 DEFB1P60022 68 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 UBE2MP61081 183 aaKnown RBP16.01■□□□□ 0.15
PACRGL-220ENST00000508952 THAP8Q8NA92 274 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 CSNK1G2-AS1Q8NCQ2 148 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 WDR12Q9GZL7 423 aaKnown RBP16.01■□□□□ 0.15
PACRGL-220ENST00000508952 SEPSECSQ9HD40 501 aaKnown RBP16.01■□□□□ 0.15
PACRGL-220ENST00000508952 PFDN2Q9UHV9 154 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 X6R8D5 127 aa16.01■□□□□ 0.15
PACRGL-220ENST00000508952 SNRPGP15A8MWD9 76 aa16■□□□□ 0.15
PACRGL-220ENST00000508952 SPANXN5Q5MJ07 72 aa16■□□□□ 0.15
PACRGL-220ENST00000508952 PPP1R14BQ96C90 147 aa16■□□□□ 0.15
PACRGL-220ENST00000508952 SDHCQ99643 169 aaPredicted RBP16■□□□□ 0.15
PACRGL-220ENST00000508952 NAP1L6A6NFF2 107 aa15.99■□□□□ 0.15
PACRGL-220ENST00000508952 H3BMM0 161 aa15.99■□□□□ 0.15
PACRGL-220ENST00000508952 MIFP14174 115 aa15.99■□□□□ 0.15
PACRGL-220ENST00000508952 RPP30P78346 268 aaKnown RBP15.99■□□□□ 0.15
PACRGL-220ENST00000508952 XCL2Q9UBD3 114 aa15.99■□□□□ 0.15
PACRGL-220ENST00000508952 TBC1D24Q9ULP9 559 aa15.99■□□□□ 0.15
PACRGL-220ENST00000508952 NKX2-1P43699 371 aaPredicted RBP15.98■□□□□ 0.15
PACRGL-220ENST00000508952 GDF5OSQ5U4N7 250 aa15.98■□□□□ 0.15
PACRGL-220ENST00000508952 LINC00052Q96N35 136 aa15.98■□□□□ 0.15
PACRGL-220ENST00000508952 OR4E1P0C645 316 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 HLA-DRB4P13762 266 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 BTCP35070 178 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 NUTF2P61970 127 aaKnown RBP15.97■□□□□ 0.15
PACRGL-220ENST00000508952 POLR2GP62487 172 aaKnown RBP eCLIP15.97■□□□□ 0.15
PACRGL-220ENST00000508952 ID3Q02535 119 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 C1orf194Q5T5A4 169 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 HRH4Q9H3N8 390 aa15.97■□□□□ 0.15
PACRGL-220ENST00000508952 STRAPQ9Y3F4 350 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms