RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 LOC105371242A0A075B767 164 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 TRAV5A0A0B4J249 113 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGHV1-24A0A0C4DH33 117 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 A0A1B0GUT8 65 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 C19orf71A6NCJ1 209 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PGPA6NDG6 321 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 VSTM5A8MXK1 200 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 NPIPB6E9PJ23 425 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 M0R1B8 84 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 TAX1BP3O14907 124 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 SPRY3O43610 288 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGHV3-7P01780 117 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGKV1-16P04430 117 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 TCRAP04437 139 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PYYP10082 97 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 GATA2P23769 480 aaPredicted RBP4□□□□□ -1.77
HMGB3P16-201ENST00000508037 HTR1DP28221 377 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 GPR183P32249 361 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 GPR6P46095 362 aaPredicted RBP4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PLP1P60201 277 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 RNF151Q2KHN1 245 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 MPV17L2Q567V2 206 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 OCIAD2Q56VL3 154 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 GDF5OSQ5U4N7 250 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 LINC01545Q5VT33 79 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 FA2HQ7L5A8 372 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 ASCL5Q7RTU5 278 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 BPIFA4PQ86YQ2 179 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 LYPD1Q8N2G4 141 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 TMEM105Q8N8V8 129 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 TEX45Q8NA69 505 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 C9orf106Q8NAJ2 232 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 GATD1Q8NB37 220 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 H1FXQ92522 213 aaKnown RBP4□□□□□ -1.77
HMGB3P16-201ENST00000508037 LEAP2Q969E1 77 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PGLYRP4Q96LB8 373 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 MLST8Q9BVC4 326 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 MRPL20Q9BYC9 149 aaKnown RBP4□□□□□ -1.77
HMGB3P16-201ENST00000508037 SCRT2Q9NQ03 307 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 HIGD1AQ9Y241 93 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PPIAL4AQ9Y536 164 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 PCSK5Q92824 1860 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 DOCK10Q96BY6 2186 aa4□□□□□ -1.77
HMGB3P16-201ENST00000508037 HCFC1P51610 2035 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 SERTM2A0A1B0GWG4 89 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MBD3L4A6NDZ8 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MBD3L3A6NE82 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 FBLL1A6NHQ2 334 aaKnown RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MBD3L5A6NJ08 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 SRRM4A7MD48 611 aaKnown RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 SIVA1O15304 175 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MOSP00540 346 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 CRYGCP07315 174 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 COX8AP10176 69 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 ORM2P19652 201 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 S100A7P31151 101 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 FOXA3P55318 350 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 ARF6P62330 175 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MAJINQ3KP22 176 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 FAM120AOSQ5T036 256 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 PVRIGQ6DKI7 326 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 PATE2Q6UY27 113 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 TCF24Q7RTU0 167 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MOB3BQ86TA1 216 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 Q86TA4 180 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 RPRMLQ8N4K4 120 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 TMEM75Q8N9X5 138 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 TMEM116Q8NCL8 245 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR10W1Q8NGF6 305 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR4X2Q8NGF9 303 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR9G4Q8NGQ1 327 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR1B1Q8NGR6 318 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 MBD3L2Q8NHZ7 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 C8orf46Q8TAG6 207 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 BLNKQ8WV28 456 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 TNFRSF14Q92956 283 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 FAM122AQ96E09 287 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 LINC00479Q96M42 142 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 CCL13Q99616 98 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 SRSF8Q9BRL6 282 aaKnown RBP3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 Q9H3A6 140 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 CST9LQ9H4G1 147 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 AP5S1Q9NUS5 200 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 CLEC5AQ9NY25 188 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZNF835Q9Y2P0 537 aa3.99□□□□□ -1.77
HMGB3P16-201ENST00000508037 SDK1Q7Z5N4 2213 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGKV1D-37A0A075B6S9 117 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 MUC21A0A0G2JKD1 596 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 CBY3A6NI87 242 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 H3BRM9 83 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 NDUFB3O43676 98 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 SCGB2A1O75556 95 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 FSTL3O95633 263 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 GP9P14770 177 aa3.98□□□□□ -1.77
HMGB3P16-201ENST00000508037 MYOD1P15172 320 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms