RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 GNG7O60262 68 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 RD3LP0DJH9 198 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 PPIFP30405 207 aaKnown RBP10.39□□□□□ -0.75
LMNA-220ENST00000504687 RHEBQ15382 184 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 TIGITQ495A1 244 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 ZNF502Q8TBZ5 544 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
LMNA-220ENST00000504687 SOX21Q9Y651 276 aaPredicted RBP10.39□□□□□ -0.75
LMNA-220ENST00000504687 SETXQ7Z333 2677 aaKnown RBP10.39□□□□□ -0.75
LMNA-220ENST00000504687 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 FAM74A7A6NL05 159 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 B4DEV8 164 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 OR2J3O76001 311 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 LINC00305Q7Z4B0 112 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 BCL6BQ8N143 479 aaPredicted RBP10.38□□□□□ -0.75
LMNA-220ENST00000504687 TMEM86BQ8N661 226 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 ZNF491Q8N8L2 437 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
LMNA-220ENST00000504687 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 G3V318 75 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
LMNA-220ENST00000504687 CTSGP08311 255 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 S100A7P31151 101 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 RHOGP84095 191 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 CFHR3Q02985 330 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 LY6EQ16553 131 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 ZNF343Q6P1L6 599 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 Q8WTZ3 238 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 TUBA4BQ9H853 241 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 DOK5Q9P104 306 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
LMNA-220ENST00000504687 A0A087WWC5 75 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 H3BQ15 152 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 DNASE2O00115 360 aaPredicted RBP10.36□□□□□ -0.75
LMNA-220ENST00000504687 CD5LO43866 347 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR7C2O60412 319 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 IGLV1-40P01703 118 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 C15orf32Q32M92 178 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 FAM209BQ5JX69 171 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 IQCF2Q8IXL9 164 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR5AU1Q8NGC0 362 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR1B1Q8NGR6 318 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR4F5Q8NH21 305 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 EEF1AKMT3Q96AZ1 226 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR4F4Q96R69 305 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 GSX1Q9H4S2 264 aaPredicted RBP10.36□□□□□ -0.75
LMNA-220ENST00000504687 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
LMNA-220ENST00000504687 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
LMNA-220ENST00000504687 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 H3BRN7 92 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 SCO1O75880 301 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 ORM2P19652 201 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 KRTAP1-1Q07627 177 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 Q56UQ5 140 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 CIARTQ8N365 385 aaPredicted RBP10.35□□□□□ -0.75
LMNA-220ENST00000504687 RPUSD4Q96CM3 377 aaKnown RBP10.35□□□□□ -0.75
LMNA-220ENST00000504687 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
LMNA-220ENST00000504687 PARLQ9H300 379 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 TMEM160Q9NX00 188 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 NAT8Q9UHE5 227 aa10.35□□□□□ -0.75
LMNA-220ENST00000504687 C7orf77A4D0Y5 90 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
LMNA-220ENST00000504687 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 NUPL2O15504 423 aaKnown RBP10.34□□□□□ -0.75
LMNA-220ENST00000504687 GP9P14770 177 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 NPPCP23582 126 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 ADMP35318 185 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 MYCNOSP40205 109 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 ATP5G3P48201 142 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 BLCAPP62952 87 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 UBE2L3P68036 154 aaKnown RBP10.34□□□□□ -0.75
LMNA-220ENST00000504687 ATP5G2Q06055 141 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 AWAT1Q58HT5 328 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 CST9LP1Q5W188 147 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 SMIM7Q9BQ49 75 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 TMEM242Q9NWH2 141 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms