RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CA1P00915 261 aaPredicted RBP16.24■□□□□ 0.19
LSM6-203ENST00000503982 STHQ8IWL8 128 aa16.24■□□□□ 0.19
LSM6-203ENST00000503982 RARRES2Q99969 163 aa16.24■□□□□ 0.19
LSM6-203ENST00000503982 HYDINQ4G0P3 5121 aa16.24■□□□□ 0.19
LSM6-203ENST00000503982 LY6G6CO95867 125 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 IFNA21P01568 189 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 HOXB5P09067 269 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 P2RY1P47900 373 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 RND2P52198 227 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 ATP5IP56385 69 aaPredicted RBP16.23■□□□□ 0.19
LSM6-203ENST00000503982 C2orf83Q53S99 150 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 Q8WTZ3 238 aa16.23■□□□□ 0.19
LSM6-203ENST00000503982 KLK5Q9Y337 293 aaPredicted RBP16.23■□□□□ 0.19
LSM6-203ENST00000503982 INMT-MINDY4F8WBC2 141 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 ADAP1O75689 374 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 IFNA10P01566 189 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 SLC25A4P12235 298 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 NPY1RP25929 384 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 OR10J1P30954 320 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 ETFRF1Q6IPR1 90 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 NOXA1Q86UR1 476 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 OR1S2Q8NGQ3 325 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 OR1S1Q8NH92 325 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 RNASEH2CQ8TDP1 164 aaKnown RBP16.22■□□□□ 0.19
LSM6-203ENST00000503982 GATAD1Q8WUU5 269 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 SEC22CQ9BRL7 303 aa16.22■□□□□ 0.19
LSM6-203ENST00000503982 GPN1Q9HCN4 374 aaPredicted RBP16.22■□□□□ 0.19
LSM6-203ENST00000503982 TRAV2A0A0B4J234 112 aa16.21■□□□□ 0.19
LSM6-203ENST00000503982 EIF2B2P49770 351 aaKnown RBP16.21■□□□□ 0.19
LSM6-203ENST00000503982 CEMP1Q6PRD7 247 aaPredicted RBP16.21■□□□□ 0.19
LSM6-203ENST00000503982 C12orf45Q8N5I9 185 aaPredicted RBP16.21■□□□□ 0.19
LSM6-203ENST00000503982 FAM24BQ8N5W8 94 aa16.21■□□□□ 0.19
LSM6-203ENST00000503982 OR4D5Q8NGN0 318 aa16.21■□□□□ 0.19
LSM6-203ENST00000503982 OR11H2Q8NH07 326 aa16.21■□□□□ 0.19
LSM6-203ENST00000503982 ACY3Q96HD9 319 aa16.21■□□□□ 0.19
LSM6-203ENST00000503982 HNRNPCP07910 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
LSM6-203ENST00000503982 CRYBB3P26998 211 aa16.2■□□□□ 0.18
LSM6-203ENST00000503982 ID3Q02535 119 aa16.2■□□□□ 0.18
LSM6-203ENST00000503982 PRSS54Q6PEW0 395 aa16.2■□□□□ 0.18
LSM6-203ENST00000503982 DTD1Q8TEA8 209 aa16.2■□□□□ 0.18
LSM6-203ENST00000503982 C7orf66A4D0T2 115 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 MED6O75586 246 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 IGKV1-17P01599 117 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 ZNF688P0C7X2 276 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 LINC00476Q8WZB0 136 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 RBKSQ9H477 322 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 U3KQ87 197 aa16.19■□□□□ 0.18
LSM6-203ENST00000503982 IL4P05112 153 aa16.18■□□□□ 0.18
LSM6-203ENST00000503982 IGLC1P0CG04 106 aa16.18■□□□□ 0.18
LSM6-203ENST00000503982 NPIPB3Q92617 1050 aa16.18■□□□□ 0.18
LSM6-203ENST00000503982 CIB3Q96Q77 187 aaPredicted RBP16.18■□□□□ 0.18
LSM6-203ENST00000503982 FBXL17Q9UF56 701 aa16.18■□□□□ 0.18
LSM6-203ENST00000503982 AGRNO00468 2067 aa16.18■□□□□ 0.18
LSM6-203ENST00000503982 K7EQG2 157 aa16.17■□□□□ 0.18
LSM6-203ENST00000503982 YPEL3P61236 119 aaPredicted RBP16.17■□□□□ 0.18
LSM6-203ENST00000503982 PHLDA1Q8WV24 401 aaPredicted RBP16.17■□□□□ 0.18
LSM6-203ENST00000503982 HELTA6NFD8 242 aa16.16■□□□□ 0.18
LSM6-203ENST00000503982 SYNGR2O43760 224 aa16.16■□□□□ 0.18
LSM6-203ENST00000503982 IFNA4P05014 189 aa16.16■□□□□ 0.18
LSM6-203ENST00000503982 ATF4P18848 351 aaPredicted RBP16.16■□□□□ 0.18
LSM6-203ENST00000503982 IAH1Q2TAA2 248 aaPredicted RBP16.16■□□□□ 0.18
LSM6-203ENST00000503982 ZBTB8BQ8NAP8 495 aaPredicted RBP16.16■□□□□ 0.18
LSM6-203ENST00000503982 TMEM170AQ8WVE7 144 aa16.16■□□□□ 0.18
LSM6-203ENST00000503982 PAIP2BQ9ULR5 123 aaKnown RBP16.16■□□□□ 0.18
LSM6-203ENST00000503982 KNCNA6PVL3 124 aa16.15■□□□□ 0.18
LSM6-203ENST00000503982 DEFB4AO15263 64 aa16.15■□□□□ 0.18
LSM6-203ENST00000503982 RD3LP0DJH9 198 aa16.15■□□□□ 0.18
LSM6-203ENST00000503982 NKX2-1P43699 371 aaPredicted RBP16.15■□□□□ 0.18
LSM6-203ENST00000503982 C11orf45Q8TAV5 145 aa16.15■□□□□ 0.18
LSM6-203ENST00000503982 AP2S1P53680 142 aaPredicted RBP16.14■□□□□ 0.17
LSM6-203ENST00000503982 NANOS2P60321 138 aaKnown RBP16.14■□□□□ 0.17
LSM6-203ENST00000503982 IL15RAQ13261 267 aa16.14■□□□□ 0.17
LSM6-203ENST00000503982 RGS21Q2M5E4 152 aa16.14■□□□□ 0.17
LSM6-203ENST00000503982 ACTL10Q5JWF8 245 aa16.14■□□□□ 0.17
LSM6-203ENST00000503982 MFFQ9GZY8 342 aa16.14■□□□□ 0.17
LSM6-203ENST00000503982 EPPK1P58107 5090 aaKnown RBP16.13■□□□□ 0.17
LSM6-203ENST00000503982 TOMM40O96008 361 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 TAS2R30P59541 319 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 USF2Q15853 346 aaPredicted RBP16.13■□□□□ 0.17
LSM6-203ENST00000503982 PSMG4Q5JS54 123 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 C16orf54Q6UWD8 224 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 SLC35E1Q96K37 410 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 C2orf50Q96LR7 162 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 PBDC1Q9BVG4 233 aa16.13■□□□□ 0.17
LSM6-203ENST00000503982 ZFP92A6NM28 416 aa16.12■□□□□ 0.17
LSM6-203ENST00000503982 OXA1LQ15070 435 aa16.12■□□□□ 0.17
LSM6-203ENST00000503982 OR51G1Q8NGK1 321 aa16.12■□□□□ 0.17
LSM6-203ENST00000503982 C11orf68Q9H3H3 251 aaKnown RBP16.12■□□□□ 0.17
LSM6-203ENST00000503982 CCSO14618 274 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 SPP1P10451 314 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 IAPPP10997 89 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 SNRPD3P62318 126 aaKnown RBP16.11■□□□□ 0.17
LSM6-203ENST00000503982 RPP30P78346 268 aaKnown RBP16.11■□□□□ 0.17
LSM6-203ENST00000503982 MORN3Q6PF18 240 aaPredicted RBP16.11■□□□□ 0.17
LSM6-203ENST00000503982 GSG1LQ6UXU4 331 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 TRPT1Q86TN4 253 aaKnown RBP16.11■□□□□ 0.17
LSM6-203ENST00000503982 DCANP1Q8TF63 244 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 GLMPQ8WWB7 406 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 RAB40CQ96S21 281 aa16.11■□□□□ 0.17
LSM6-203ENST00000503982 U3KQE9 123 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms