RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 SIGLECL1Q8N7X8 197 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
SF3A1-210ENST00000498259 RNF125Q96EQ8 232 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
SF3A1-210ENST00000498259 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 RFNGQ9Y644 331 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 IGHV3-21A0A0B4J1V1 117 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 LOC102723971A0A1B0GUV8 181 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 IGKV1-17P01599 117 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 IGHG4P01861 327 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 IL4P05112 153 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 CLEC3BP05452 202 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 ELANEP08246 267 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 SFTA3P0C7M3 94 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 ARL14EPLP0DKL9 152 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 PF4V1P10720 104 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 CD99P14209 185 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 GCHFRP30047 84 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 PPIFP30405 207 aaKnown RBP6.61□□□□□ -1.35
SF3A1-210ENST00000498259 BMI1P35226 326 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 LYZP61626 148 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 TIGITQ495A1 244 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 FBLN7Q53RD9 439 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 CST9LP1Q5W188 147 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 BPIFA4PQ86YQ2 179 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 CCDC28AQ8IWP9 274 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF502Q8TBZ5 544 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 GPR82Q96P67 336 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 NIPSNAP3BQ9BS92 247 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 OR51M1Q9H341 326 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 RABAC1Q9UI14 185 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 PRELID1Q9Y255 219 aa6.61□□□□□ -1.35
SF3A1-210ENST00000498259 CREBBPQ92793 2442 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 PSMB11A5LHX3 300 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 OR2T8A6NH00 312 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 LINC01548A6NM66 108 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 C11orf94C9JXX5 98 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 TGOLN2O43493 480 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 APOC3P02656 99 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 CTSGP08311 255 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 GATA2P23769 480 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 MEOX2P50222 304 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 UBE2L3P68036 154 aaKnown RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 CCL20P78556 96 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 DEFA5Q01523 94 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 PNRC1Q12796 327 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 FOXE3Q13461 319 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 GCSAMLQ5JQS6 135 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 Q8N2B8 174 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF491Q8N8L2 437 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 OR4F17Q8NGA8 305 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 OR5AU1Q8NGC0 362 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 OR4F5Q8NH21 305 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 TMEM37Q8WXS4 190 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 OR4F4Q96R69 305 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 PAXXQ9BUH6 204 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 GNB4Q9HAV0 340 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 MRPL27Q9P0M9 148 aaKnown RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 TMEM14CQ9P0S9 112 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 CARHSP1Q9Y2V2 147 aaKnown RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 CR1P17927 2039 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 ABCA2Q9BZC7 2435 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 GCN1Q92616 2671 aaKnown RBP6.6□□□□□ -1.35
SF3A1-210ENST00000498259 POLQO75417 2590 aa6.6□□□□□ -1.35
SF3A1-210ENST00000498259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.59□□□□□ -1.35
SF3A1-210ENST00000498259 WI2-2373I1.2A0A1W2PRP0 233 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 A0A1W2PS18 150 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-210ENST00000498259 PAGE4O60829 102 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 RPL7P18124 248 aaKnown RBP6.59□□□□□ -1.35
SF3A1-210ENST00000498259 NPPCP23582 126 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 GPR183P32249 361 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 ARL3P36405 182 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 ICAM4Q14773 271 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 FAM106AQ4KMX7 169 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 C10orf91Q5T1B1 145 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 C1orf194Q5T5A4 169 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 CLEC19AQ6UXS0 136 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 C19orf35Q6ZS72 473 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 WFDC12Q8WWY7 111 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 GRAMD2BQ96HH9 432 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 METTL26Q96S19 204 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 RARRES2Q99969 163 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 SLC25A39Q9BZJ4 359 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-210ENST00000498259 TMEM231Q9H6L2 316 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 DOK5Q9P104 306 aa6.59□□□□□ -1.35
SF3A1-210ENST00000498259 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 B4DEV8 164 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 NDUFA4O00483 81 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 GGCTO75223 188 aaKnown RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 S100A9P06702 114 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms