RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CD33P20138 364 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 GATA2P23769 480 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-227ENST00000498056 CAMLGP49069 296 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-227ENST00000498056 REC114Q7Z4M0 266 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 OR51G1Q8NGK1 321 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 Q8WTZ3 238 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 ARPC5LQ9BPX5 153 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 WDR61Q9GZS3 305 aaKnown RBP10.38□□□□□ -0.75
CPNE1-227ENST00000498056 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 PEMTQ9UBM1 199 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
CPNE1-227ENST00000498056 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 A0A0D9SG52 128 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 BOLA2-SMG1P6H3BVE0 249 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 BCL2L11O43521 198 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 MPDU1O75352 247 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 EDN2P20800 178 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 KLF5Q13887 457 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-227ENST00000498056 OPCMLQ14982 345 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 RPL7L1Q6DKI1 246 aaKnown RBP10.37□□□□□ -0.75
CPNE1-227ENST00000498056 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 STPG3Q8N7X2 389 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 HSD17B11Q8NBQ5 300 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 OR9G4Q8NGQ1 327 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
CPNE1-227ENST00000498056 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 DOK5Q9P104 306 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
CPNE1-227ENST00000498056 A8MWP6 167 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 TAAR5O14804 337 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 B2MP61769 119 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 SELENOTP62341 195 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 USF2Q15853 346 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-227ENST00000498056 MIC13Q5XKP0 118 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 TMUB2Q71RG4 321 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 C9orf62Q8N4C0 152 aa10.36□□□□□ -0.75
CPNE1-227ENST00000498056 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-227ENST00000498056 IGHV3-49A0A0A0MS15 119 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 TMEM213A2RRL7 107 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 LGALS9O00182 355 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 ELLP55199 621 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-227ENST00000498056 TM4SF20Q53R12 229 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 TMEM182Q6ZP80 229 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-227ENST00000498056 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 METTL26Q96S19 204 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-227ENST00000498056 PXMP4Q9Y6I8 212 aa10.35□□□□□ -0.75
CPNE1-227ENST00000498056 C2orf70A6NJV1 201 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 SEC14L6B5MCN3 397 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 COX7A2P2O60397 106 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 SAP30O75446 220 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 CFDP00746 253 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-227ENST00000498056 OR5G3P0C626 314 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 ORM2P19652 201 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-227ENST00000498056 DYNLRB2Q8TF09 96 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 NARS2Q96I59 477 aaKnown RBP10.34□□□□□ -0.75
CPNE1-227ENST00000498056 ELOVL1Q9BW60 279 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 SLC45A2Q9UMX9 530 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 VWFP04275 2813 aa10.34□□□□□ -0.75
CPNE1-227ENST00000498056 DNHD1Q96M86 4753 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 WI2-2373I1.2A0A1W2PRP0 233 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 JTBO76095 146 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPNE1-227ENST00000498056 ATP6V0CP27449 155 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 PRR20EP86478 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 PRR20CP86479 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 PRR20DP86480 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 PRR20BP86481 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 PRR20AP86496 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 Q6ZRG5 221 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 SH3BGRL3Q9H299 93 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
CPNE1-227ENST00000498056 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 C4BPBP20851 252 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
CPNE1-227ENST00000498056 FFAR4Q5NUL3 377 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 PRR31Q5SQ13 230 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 UHRF2Q96PU4 802 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 RFNGQ9Y644 331 aa10.32□□□□□ -0.76
CPNE1-227ENST00000498056 TRRAPQ9Y4A5 3859 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms