RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NUPR2A6NF83 97 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 BUB3O43684 328 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 PSG1P11464 419 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 GAMTQ14353 236 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 LEMD1Q68G75 181 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 OR8G2PQ6IF36 304 aa17.77■□□□□ 0.44
HLA-C-209ENST00000495835 DHRS2Q13268 280 aa17.76■□□□□ 0.43
HLA-C-209ENST00000495835 TRIQKQ629K1 86 aa17.76■□□□□ 0.43
HLA-C-209ENST00000495835 MORN3Q6PF18 240 aaPredicted RBP17.76■□□□□ 0.43
HLA-C-209ENST00000495835 ZFP92A6NM28 416 aa17.75■□□□□ 0.43
HLA-C-209ENST00000495835 NDUFB6O95139 128 aa17.75■□□□□ 0.43
HLA-C-209ENST00000495835 CA1P00915 261 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-209ENST00000495835 BAK1Q16611 211 aa17.75■□□□□ 0.43
HLA-C-209ENST00000495835 RNF125Q96EQ8 232 aa17.75■□□□□ 0.43
HLA-C-209ENST00000495835 NDUFA13Q9P0J0 144 aa17.75■□□□□ 0.43
HLA-C-209ENST00000495835 CXorf65A6NEN9 183 aa17.74■□□□□ 0.43
HLA-C-209ENST00000495835 SYNGR2O43760 224 aa17.74■□□□□ 0.43
HLA-C-209ENST00000495835 SPP1P10451 314 aa17.74■□□□□ 0.43
HLA-C-209ENST00000495835 EWSR1Q01844 656 aaKnown RBP eCLIP17.74■□□□□ 0.43
HLA-C-209ENST00000495835 CNPY1Q3B7I2 92 aa17.74■□□□□ 0.43
HLA-C-209ENST00000495835 TRPT1Q86TN4 253 aaKnown RBP17.74■□□□□ 0.43
HLA-C-209ENST00000495835 C7orf50Q9BRJ6 194 aaKnown RBP17.74■□□□□ 0.43
HLA-C-209ENST00000495835 C11orf68Q9H3H3 251 aaKnown RBP17.74■□□□□ 0.43
HLA-C-209ENST00000495835 NRN1Q9NPD7 142 aa17.74■□□□□ 0.43
HLA-C-209ENST00000495835 C9orf170A2RU37 121 aa17.73■□□□□ 0.43
HLA-C-209ENST00000495835 CENPXA8MT69 81 aa17.73■□□□□ 0.43
HLA-C-209ENST00000495835 ZNF688P0C7X2 276 aa17.73■□□□□ 0.43
HLA-C-209ENST00000495835 SIGLEC15Q6ZMC9 328 aa17.73■□□□□ 0.43
HLA-C-209ENST00000495835 OR11H2Q8NH07 326 aa17.73■□□□□ 0.43
HLA-C-209ENST00000495835 IGKV1D-37A0A075B6S9 117 aa17.72■□□□□ 0.43
HLA-C-209ENST00000495835 CFDP00746 253 aaPredicted RBP17.72■□□□□ 0.43
HLA-C-209ENST00000495835 HOXB5P09067 269 aa17.72■□□□□ 0.43
HLA-C-209ENST00000495835 SNRPD3P62318 126 aaKnown RBP17.72■□□□□ 0.43
HLA-C-209ENST00000495835 GGNBP1Q5YKI7 109 aa17.72■□□□□ 0.43
HLA-C-209ENST00000495835 CEMP1Q6PRD7 247 aaPredicted RBP17.72■□□□□ 0.43
HLA-C-209ENST00000495835 TRGV9Q99603 122 aa17.72■□□□□ 0.43
HLA-C-209ENST00000495835 HYDINQ4G0P3 5121 aa17.71■□□□□ 0.43
HLA-C-209ENST00000495835 SNRPGP15A8MWD9 76 aa17.71■□□□□ 0.43
HLA-C-209ENST00000495835 IAPPP10997 89 aa17.71■□□□□ 0.43
HLA-C-209ENST00000495835 C1orf194Q5T5A4 169 aa17.71■□□□□ 0.43
HLA-C-209ENST00000495835 FBXL17Q9UF56 701 aa17.71■□□□□ 0.43
HLA-C-209ENST00000495835 KLK5Q9Y337 293 aaPredicted RBP17.71■□□□□ 0.43
HLA-C-209ENST00000495835 ZNF90Q03938 601 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 PMS2P11Q13670 270 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 THAP8Q8NA92 274 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 COQ8AQ8NI60 647 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 SDHCQ99643 169 aaPredicted RBP17.7■□□□□ 0.42
HLA-C-209ENST00000495835 MFFQ9GZY8 342 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 AGRNO00468 2067 aa17.7■□□□□ 0.42
HLA-C-209ENST00000495835 ID3Q02535 119 aa17.69■□□□□ 0.42
HLA-C-209ENST00000495835 RAB40CQ96S21 281 aa17.69■□□□□ 0.42
HLA-C-209ENST00000495835 PBDC1Q9BVG4 233 aa17.69■□□□□ 0.42
HLA-C-209ENST00000495835 ALMS1Q8TCU4 4167 aa17.69■□□□□ 0.42
HLA-C-209ENST00000495835 PRSS46E5RG02 174 aa17.68■□□□□ 0.42
HLA-C-209ENST00000495835 WRBO00258 174 aa17.68■□□□□ 0.42
HLA-C-209ENST00000495835 IFNA21P01568 189 aa17.68■□□□□ 0.42
HLA-C-209ENST00000495835 OR4E1P0C645 316 aa17.68■□□□□ 0.42
HLA-C-209ENST00000495835 PSMG4Q5JS54 123 aa17.68■□□□□ 0.42
HLA-C-209ENST00000495835 GIG44P09565 113 aaPredicted RBP17.67■□□□□ 0.42
HLA-C-209ENST00000495835 NUTF2P61970 127 aaKnown RBP17.67■□□□□ 0.42
HLA-C-209ENST00000495835 ACTL10Q5JWF8 245 aa17.67■□□□□ 0.42
HLA-C-209ENST00000495835 MAGT1Q9H0U3 335 aa17.67■□□□□ 0.42
HLA-C-209ENST00000495835 PAIP2BQ9ULR5 123 aaKnown RBP17.67■□□□□ 0.42
HLA-C-209ENST00000495835 SLC45A2Q9UMX9 530 aa17.67■□□□□ 0.42
HLA-C-209ENST00000495835 STRAPQ9Y3F4 350 aaKnown RBP17.67■□□□□ 0.42
HLA-C-209ENST00000495835 IGKV1OR2-108A0A075B7D4 117 aa17.66■□□□□ 0.42
HLA-C-209ENST00000495835 KNCNA6PVL3 124 aa17.66■□□□□ 0.42
HLA-C-209ENST00000495835 IL7P13232 177 aa17.66■□□□□ 0.42
HLA-C-209ENST00000495835 ADAP1O75689 374 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 S100A7P31151 101 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 BTCP35070 178 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 NKX2-1P43699 371 aaPredicted RBP17.65■□□□□ 0.42
HLA-C-209ENST00000495835 SPANXN5Q5MJ07 72 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 C11orf45Q8TAV5 145 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 PHLDA1Q8WV24 401 aaPredicted RBP17.65■□□□□ 0.42
HLA-C-209ENST00000495835 LINC00476Q8WZB0 136 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 C1QTNF4Q9BXJ3 329 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 FLVCR2Q9UPI3 526 aa17.65■□□□□ 0.42
HLA-C-209ENST00000495835 ZNF705EA8MWA4 302 aaPredicted RBP17.64■□□□□ 0.41
HLA-C-209ENST00000495835 MIFP14174 115 aa17.64■□□□□ 0.41
HLA-C-209ENST00000495835 ID1P41134 155 aa17.64■□□□□ 0.41
HLA-C-209ENST00000495835 LYZP61626 148 aa17.64■□□□□ 0.41
HLA-C-209ENST00000495835 SAMD13Q5VXD3 122 aa17.64■□□□□ 0.41
HLA-C-209ENST00000495835 OR4D5Q8NGN0 318 aa17.64■□□□□ 0.41
HLA-C-209ENST00000495835 C4orf46Q504U0 113 aa17.63■□□□□ 0.41
HLA-C-209ENST00000495835 HRH4Q9H3N8 390 aa17.63■□□□□ 0.41
HLA-C-209ENST00000495835 H3BMM0 161 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 OR2F1Q13607 317 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 Q8NAQ8 132 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 CSNK1G2-AS1Q8NCQ2 148 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 BPIFCQ8NFQ6 507 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 SMIM8Q96KF7 97 aa17.62■□□□□ 0.41
HLA-C-209ENST00000495835 LINC00854A0A1B0GVQ3 168 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 HLA-DRB4P13762 266 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 C4BPBP20851 252 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 PSMB3P49720 205 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 POLR2GP62487 172 aaKnown RBP eCLIP17.61■□□□□ 0.41
HLA-C-209ENST00000495835 TMEM144Q7Z5S9 345 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 OR8I2Q8N0Y5 310 aa17.61■□□□□ 0.41
HLA-C-209ENST00000495835 MITD1Q8WV92 249 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms