RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 CD33P20138 364 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 GNPNAT1Q96EK6 184 aaPredicted RBP11.47□□□□□ -0.57
ACTB-213ENST00000493945 METTL26Q96S19 204 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 NEURL2Q9BR09 285 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 WDR61Q9GZS3 305 aaKnown RBP11.47□□□□□ -0.57
ACTB-213ENST00000493945 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
ACTB-213ENST00000493945 A0A1W2PS18 150 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 A8MWP6 167 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 AGPAT2O15120 278 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 BCL2L11O43521 198 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 IGKV1-17P01599 117 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 IL4P05112 153 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 ADMP35318 185 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 EIF2B2P49770 351 aaKnown RBP11.46□□□□□ -0.57
ACTB-213ENST00000493945 SLURP1P55000 103 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 SYNJ2BPP57105 145 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 PPP1R14BQ96C90 147 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 GRAMD2BQ96HH9 432 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 PFDN5Q99471 154 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 NPCDR1Q9BY65 106 aa11.46□□□□□ -0.57
ACTB-213ENST00000493945 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.57
ACTB-213ENST00000493945 LSM4Q9Y4Z0 139 aaKnown RBP11.46□□□□□ -0.57
ACTB-213ENST00000493945 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.58
ACTB-213ENST00000493945 K7EMT4 169 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 LINC00869P0C866 280 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 PSG1P11464 419 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 LYZP61626 148 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 KLF5Q13887 457 aaPredicted RBP11.45□□□□□ -0.58
ACTB-213ENST00000493945 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
ACTB-213ENST00000493945 OR9G4Q8NGQ1 327 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
ACTB-213ENST00000493945 DUX3Q96PT4 197 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 PBDC1Q9BVG4 233 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 RABAC1Q9UI14 185 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 TIMM9Q9Y5J7 89 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 STAB1Q9NY15 2570 aa11.45□□□□□ -0.58
ACTB-213ENST00000493945 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
ACTB-213ENST00000493945 TSPAN15O95858 294 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 CD5P06127 495 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 NPPCP23582 126 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 RPL29P47914 159 aaKnown RBP11.44□□□□□ -0.58
ACTB-213ENST00000493945 INSL3P51460 131 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 B2MP61769 119 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 OPCMLQ14982 345 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 LINC00482Q8N8I6 264 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 OR11H4Q8NGC9 324 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 DYNLRB2Q8TF09 96 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
ACTB-213ENST00000493945 ZNF471Q9BX82 626 aaPredicted RBP11.44□□□□□ -0.58
ACTB-213ENST00000493945 ZMAT5Q9UDW3 170 aaKnown RBP11.44□□□□□ -0.58
ACTB-213ENST00000493945 IGKV1D-37A0A075B6S9 117 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 IGKV1OR2-108A0A075B7D4 117 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 COX7A2P2O60397 106 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 HYPMO75409 117 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 MBP02144 154 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
ACTB-213ENST00000493945 TPT1P13693 172 aaKnown RBP11.43□□□□□ -0.58
ACTB-213ENST00000493945 ZNF90Q03938 601 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 PRR31Q5SQ13 230 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 STPG3Q8N7X2 389 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 DLX4Q92988 240 aaPredicted RBP11.43□□□□□ -0.58
ACTB-213ENST00000493945 RNF2Q99496 336 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 MGST2Q99735 147 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
ACTB-213ENST00000493945 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
ACTB-213ENST00000493945 PXMP4Q9Y6I8 212 aa11.43□□□□□ -0.58
ACTB-213ENST00000493945 OR5G3P0C626 314 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 SERF2P84101 59 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 C9orf66Q5T8R8 295 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 HSD17B11Q8NBQ5 300 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 OR1B1Q8NGR6 318 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 HIGD1AQ9Y241 93 aa11.42□□□□□ -0.58
ACTB-213ENST00000493945 TENM1Q9UKZ4 2725 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 ORM2P19652 201 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 CXCL2P19875 107 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 PLP1P60201 277 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
ACTB-213ENST00000493945 GATAD1Q8WUU5 269 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 SIGLEC8Q9NYZ4 499 aa11.41□□□□□ -0.58
ACTB-213ENST00000493945 TECRQ9NZ01 308 aaKnown RBP11.41□□□□□ -0.58
ACTB-213ENST00000493945 WI2-2373I1.2A0A1W2PRP0 233 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 C2orf70A6NJV1 201 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 SAP30O75446 220 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 C10orf113Q5VZT2 155 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 RPL7L1Q6DKI1 246 aaKnown RBP11.4□□□□□ -0.58
ACTB-213ENST00000493945 LAMTOR1Q6IAA8 161 aa11.4□□□□□ -0.58
ACTB-213ENST00000493945 SLC51BQ86UW2 128 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms