RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	NAA60	Q9H7X0	242 aa		5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	CACNG5	Q9UF02	275 aa		5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	SCP2D1	Q9UJQ7	156 aa		5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	RABL2B	Q9UNT1	228 aa		5.52	□□□□□ -1.53
RBM39-238	ENST00000493853	GAGE12B	A1L429	117 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	GAGE12H	A6NDE8	117 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	NOL3	O60936	208 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	IFNA10	P01566	189 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	ZNF688	P0C7X2	276 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	SULT1A3	P0DMM9	295 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	SULT1A4	P0DMN0	295 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	OR10J1	P30954	320 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	RND2	P52198	227 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	NUTF2	P61970	127 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	DHRS2	Q13268	280 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	C2orf83	Q53S99	150 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	TMEM41B	Q5BJD5	291 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	LGALS9C	Q6DKI2	356 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	PVRIG	Q6DKI7	326 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	FAAP20	Q6NZ36	180 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	MORN3	Q6PF18	240 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	SELENOH	Q8IZQ5	122 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	SLC24A4	Q8NFF2	622 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	C2CD4C	Q8TF44	421 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	SMIM4	Q8WVI0	70 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	GPR146	Q96CH1	333 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	ACY3	Q96HD9	319 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	MRPS26	Q9BYN8	205 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	C11orf68	Q9H3H3	251 aa	Known RBP	5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	MCUB	Q9NWR8	336 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	GPR132	Q9UNW8	380 aa		5.51	□□□□□ -1.53
RBM39-238	ENST00000493853	STARD9	Q9P2P6	4700 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	PIGBOS1	A0A0B4J2F0	54 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	CRYM-AS1	A6NIL9	109 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	KNCN	A6PVL3	124 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	IGLL5	B9A064	214 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853		K7EQG2	157 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	GSTZ1	O43708	216 aa	Predicted RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	NXPH3	O95157	252 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	IGKV1-17	P01599	117 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	IL4	P05112	153 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	RD3L	P0DJH9	198 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	SPP1	P10451	314 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	AKR1C4	P17516	323 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	NPY1R	P25929	384 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	YPEL3	P61236	119 aa	Predicted RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	SNRPD3	P62318	126 aa	Known RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	BSX	Q3C1V8	233 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	ACTL10	Q5JWF8	245 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	PRSS54	Q6PEW0	395 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	FAM24B	Q8N5W8	94 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	OR51S1	Q8NGJ8	323 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	OR4C16	Q8NGL9	310 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	NPIPB3	Q92617	1050 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	MIXL1	Q9H2W2	232 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	MRPL36	Q9P0J6	103 aa	Known RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	RSL24D1	Q9UHA3	163 aa	Known RBP	5.5	□□□□□ -1.53
RBM39-238	ENST00000493853		U3KQ87	197 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	CSMD3	Q7Z407	3707 aa		5.5	□□□□□ -1.53
RBM39-238	ENST00000493853	SACS	Q9NZJ4	4579 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	FABP12	A6NFH5	140 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	C11orf94	C9JXX5	98 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	CTDSPL	O15194	276 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	DEDD	O75618	318 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	IGLC1	P0CG04	106 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	SMIM18	P0DKX4	95 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	ANXA3	P12429	323 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	MIF	P14174	115 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	CCR6	P51684	374 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	TCTA	P57738	103 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	RAP2B	P61225	183 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	SPCS2	Q15005	226 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	AARD	Q4LEZ3	155 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	PSMG4	Q5JS54	123 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	C16orf54	Q6UWD8	224 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	TRPT1	Q86TN4	253 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	RPP25L	Q8N5L8	163 aa	Known RBP	5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	OR1S1	Q8NH92	325 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	LHFPL5	Q8TAF8	219 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	DCANP1	Q8TF63	244 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	RAB2B	Q8WUD1	216 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	IL22RA2	Q969J5	263 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	RAB40C	Q96S21	281 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	PBDC1	Q9BVG4	233 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	C1QTNF4	Q9BXJ3	329 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	FAM30A	Q9NZY2	134 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	TBC1D24	Q9ULP9	559 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	TMEM56-RWDD3	S4R434	201 aa		5.49	□□□□□ -1.53
RBM39-238	ENST00000493853	IGHV4-28	A0A0C4DH34	117 aa		5.48	□□□□□ -1.53
RBM39-238	ENST00000493853	ANKRD20A5P	A0PJZ0	165 aa		5.48	□□□□□ -1.53
RBM39-238	ENST00000493853	ZFP92	A6NM28	416 aa		5.48	□□□□□ -1.53
RBM39-238	ENST00000493853	NUDT3	O95989	172 aa		5.48	□□□□□ -1.53
RBM39-238	ENST00000493853	TOMM40	O96008	361 aa		5.48	□□□□□ -1.53

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