RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 FABP9Q0Z7S8 132 aa8.52□□□□□ -1.05
USP4-214ENST00000491791 FXYD5Q96DB9 178 aa8.52□□□□□ -1.05
USP4-214ENST00000491791 SMIM12Q96EX1 92 aa8.52□□□□□ -1.05
USP4-214ENST00000491791 TMEM14CQ9P0S9 112 aa8.52□□□□□ -1.05
USP4-214ENST00000491791 PRRC2AP48634 2157 aaKnown RBP8.51□□□□□ -1.05
USP4-214ENST00000491791 HELTA6NFD8 242 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 GGTLC3B5MD39 225 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 OR7C2O60412 319 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 HYPMO75409 117 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 GCGP01275 180 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 TRGC2P03986 189 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 FOSL1P15407 271 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 MEOX2P50222 304 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 MMDQ15546 238 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 OR5AU1Q8NGC0 362 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 NRGNQ92686 78 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 PAXXQ9BUH6 204 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 WNT10AQ9GZT5 417 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 OR51M1Q9H341 326 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 ZNF355PQ9NSJ1 428 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 CDC42EP3Q9UKI2 254 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 KLF12Q9Y4X4 402 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 ACANP16112 2415 aa8.51□□□□□ -1.05
USP4-214ENST00000491791 TRAV30A0A087WSZ9 112 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 MDFIC2A0A1B0GVS7 189 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 PPP5D1E7EU14 171 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 K7EIM0 57 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 K7EN84 100 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 NDUFS8O00217 210 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 REG1AP05451 166 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
USP4-214ENST00000491791 TRGC1P0CF51 173 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 FCGR2BP31994 310 aaPredicted RBP8.5□□□□□ -1.05
USP4-214ENST00000491791 CDKN1AP38936 164 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 YPEL3P61236 119 aaPredicted RBP8.5□□□□□ -1.05
USP4-214ENST00000491791 FXYD3Q14802 87 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 ACTL10Q5JWF8 245 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 LINC00305Q7Z4B0 112 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 LHFPL4Q7Z7J7 247 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 FRZBQ92765 325 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 MISP3Q96FF7 219 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 IGF2BP2-AS1Q96M15 143 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 TBX15Q96SF7 602 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 ELOVL1Q9BW60 279 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 LPAR2Q9HBW0 351 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 IL36BQ9NZH7 164 aa8.5□□□□□ -1.05
USP4-214ENST00000491791 MRPL27Q9P0M9 148 aaKnown RBP8.5□□□□□ -1.05
USP4-214ENST00000491791 FLNAP21333 2647 aaKnown RBP8.49□□□□□ -1.05
USP4-214ENST00000491791 IGLV11-55A0A075B6I3 123 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 TRAV5A0A0B4J249 113 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 ISLRO14498 428 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 NDUFS7O75251 213 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 CRYBB3P26998 211 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 GNG4P50150 75 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 PDLIM4P50479 330 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 AKR1D1P51857 326 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
USP4-214ENST00000491791 SUMO1P63165 101 aaKnown RBP8.49□□□□□ -1.05
USP4-214ENST00000491791 UBE2L3P68036 154 aaKnown RBP8.49□□□□□ -1.05
USP4-214ENST00000491791 KLRD1Q13241 179 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 RUSC1-AS1Q66K80 236 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 ZNF329Q86UD4 541 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 DYNAPQ8N1N2 210 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 C1RLQ9NZP8 487 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 PITPNC1Q9UKF7 332 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 RNF24Q9Y225 148 aa8.49□□□□□ -1.05
USP4-214ENST00000491791 IFITM10A6NMD0 228 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 TOX4O94842 621 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 CNIH1O95406 144 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 FAM106CPP0CH98 169 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 GP9P14770 177 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 PAX1P15863 534 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 LGALS4P56470 323 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 CX3CL1P78423 397 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 S100A12P80511 92 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
USP4-214ENST00000491791 PAX8Q06710 450 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 PLGLAQ15195 96 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 TIGITQ495A1 244 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 COX19Q49B96 90 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 CENPWQ5EE01 88 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 ASPHD1Q5U4P2 390 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 MBD6Q96DN6 1003 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 TMEM68Q96MH6 324 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 C12orf57Q99622 126 aa8.48□□□□□ -1.05
USP4-214ENST00000491791 TXN2Q99757 166 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms