RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 V9GYH0 126 aa6.42□□□□□ -1.38
HDAC3-211ENST00000491581 IGHV3OR16-12A0A075B7B8 117 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 FABP12A6NFH5 140 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 H3BP45 60 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 BUB3O43684 328 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 GSTZ1O43708 216 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-211ENST00000491581 ATG12O94817 140 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 TOMM40O96008 361 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 RD3LP0DJH9 198 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 KLF9Q13886 244 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-211ENST00000491581 GAMTQ14353 236 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 C12orf74Q32Q52 190 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 LGALS9CQ6DKI2 356 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 MCFD2Q8NI22 146 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 DTD1Q8TEA8 209 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 C20orf173Q96LM9 149 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 SLC35B3Q9H1N7 401 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 HSPB7Q9UBY9 170 aa6.41□□□□□ -1.38
HDAC3-211ENST00000491581 PAIP2BQ9ULR5 123 aaKnown RBP6.41□□□□□ -1.38
HDAC3-211ENST00000491581 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 RPS10-NUDT3A0A1W2PQS6 291 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 A0A1W2PS18 150 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 ZNF705EA8MWA4 302 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 H3BMM0 161 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 CCNKO75909 580 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 ZNF705DP0CH99 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 ZNF705BP0CI00 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 ATF4P18848 351 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 CCR6P51684 374 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 EMP1P54849 157 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 CMC4P56277 68 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 YPEL3P61236 119 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 LYZP61626 148 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 SSBP1Q04837 148 aaKnown RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 SMCO1Q147U7 214 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 SURF2Q15527 256 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 LGI3Q8N145 548 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 TMEM217Q8N7C4 229 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 OR1S1Q8NH92 325 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 RNASEH2CQ8TDP1 164 aaKnown RBP6.4□□□□□ -1.38
HDAC3-211ENST00000491581 C2CD4CQ8TF44 421 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 RAB2BQ8WUD1 216 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 RNF125Q96EQ8 232 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 GRAMD2BQ96HH9 432 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 LINC00052Q96N35 136 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 PRRT1Q99946 306 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 TMEM231Q9H6L2 316 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 TBC1D24Q9ULP9 559 aa6.4□□□□□ -1.38
HDAC3-211ENST00000491581 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.39
HDAC3-211ENST00000491581 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 LINC00854A0A1B0GVQ3 168 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 ZFP92A6NM28 416 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 SOCS3O14543 225 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 PITX3O75364 302 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 ADAP1O75689 374 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 IFNA4P05014 189 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 HOXB5P09067 269 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 SLC25A4P12235 298 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 VAMP1P23763 118 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 TMBIM6P55061 237 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 MRPS10P82664 201 aaKnown RBP6.39□□□□□ -1.39
HDAC3-211ENST00000491581 PPP1R1AQ13522 171 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 PYDC2Q56P42 97 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 FLVCR2Q9UPI3 526 aa6.39□□□□□ -1.39
HDAC3-211ENST00000491581 A0A0B4J2A0 478 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 PRSS46E5RG02 174 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 M0R2N4 97 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 WRBO00258 174 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 SNRPCP09234 159 aaKnown RBP6.38□□□□□ -1.39
HDAC3-211ENST00000491581 SPP1P10451 314 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 UBE2MP61081 183 aaKnown RBP6.38□□□□□ -1.39
HDAC3-211ENST00000491581 ZNF709Q8N972 641 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 OR4B1Q8NGF8 309 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 C15orf40Q8WUR7 153 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 SLC25A32Q9H2D1 315 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 DOK5Q9P104 306 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 SCP2D1Q9UJQ7 156 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 KCNIP3Q9Y2W7 256 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
HDAC3-211ENST00000491581 B3GALNT1O75752 331 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 CD5P06127 495 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 MIFP14174 115 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 EIF2B2P49770 351 aaKnown RBP6.37□□□□□ -1.39
HDAC3-211ENST00000491581 BAK1Q16611 211 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 MORN3Q6PF18 240 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-211ENST00000491581 C1orf158Q8N1D5 194 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 RNF182Q8N6D2 247 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 IL22RA2Q969J5 263 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
HDAC3-211ENST00000491581 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 MFFQ9GZY8 342 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 SLC25A22Q9H936 323 aa6.37□□□□□ -1.39
HDAC3-211ENST00000491581 RSL24D1Q9UHA3 163 aaKnown RBP6.37□□□□□ -1.39
HDAC3-211ENST00000491581 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms