RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KLK5Q9Y337 293 aaPredicted RBP6.06□□□□□ -1.44
LSM2-213ENST00000491421 PIGBOS1A0A0B4J2F0 54 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 HELTA6NFD8 242 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 CCDC160A6NGH7 325 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 K7EQG2 157 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 TSC22D2O75157 780 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 LY6G6CO95867 125 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 SCGB1D1O95968 90 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 TOMM40O96008 361 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 IFNA4P05014 189 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 RD3LP0DJH9 198 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 DHRS2Q13268 280 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 KLF9Q13886 244 aaPredicted RBP6.05□□□□□ -1.44
LSM2-213ENST00000491421 USF2Q15853 346 aaPredicted RBP6.05□□□□□ -1.44
LSM2-213ENST00000491421 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 TOMM5Q8N4H5 51 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 DCANP1Q8TF63 244 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 C11orf68Q9H3H3 251 aaKnown RBP6.05□□□□□ -1.44
LSM2-213ENST00000491421 RBKSQ9H477 322 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 U3KQ87 197 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 U3KQE9 123 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 V9GYH0 126 aa6.05□□□□□ -1.44
LSM2-213ENST00000491421 DUXBA0A1W2PPF3 345 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 KNCNA6PVL3 124 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 SPP1P10451 314 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 S100A5P33763 92 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 AP2S1P53680 142 aaPredicted RBP6.04□□□□□ -1.44
LSM2-213ENST00000491421 ATP5IP56385 69 aaPredicted RBP6.04□□□□□ -1.44
LSM2-213ENST00000491421 TMEM128Q5BJH2 165 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 ACTL10Q5JWF8 245 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 MORN3Q6PF18 240 aaPredicted RBP6.04□□□□□ -1.44
LSM2-213ENST00000491421 TRPT1Q86TN4 253 aaKnown RBP6.04□□□□□ -1.44
LSM2-213ENST00000491421 C11orf45Q8TAV5 145 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 PHLDA1Q8WV24 401 aaPredicted RBP6.04□□□□□ -1.44
LSM2-213ENST00000491421 GLMPQ8WWB7 406 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 MFFQ9GZY8 342 aa6.04□□□□□ -1.44
LSM2-213ENST00000491421 ZFP92A6NM28 416 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 DEFB4AO15263 64 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 PSG1P11464 419 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 NUP62P37198 522 aaPredicted RBP6.03□□□□□ -1.44
LSM2-213ENST00000491421 NANOS2P60321 138 aaKnown RBP6.03□□□□□ -1.44
LSM2-213ENST00000491421 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
LSM2-213ENST00000491421 GAMTQ14353 236 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 ZNF79Q15937 498 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 TMEM41BQ5BJD5 291 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 PSMG4Q5JS54 123 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 OR51G1Q8NGK1 321 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 DEDD2Q8WXF8 326 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 RNF125Q96EQ8 232 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 SLC35E1Q96K37 410 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 SLC25A21Q9BQT8 299 aaPredicted RBP6.03□□□□□ -1.44
LSM2-213ENST00000491421 PBDC1Q9BVG4 233 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 NRN1Q9NPD7 142 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 FBXL17Q9UF56 701 aa6.03□□□□□ -1.44
LSM2-213ENST00000491421 FAM90A26D6RGX4 464 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 BUB3O43684 328 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 PITX3O75364 302 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 FABP1P07148 127 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
LSM2-213ENST00000491421 IAPPP10997 89 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 C4BPBP20851 252 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 GPX4P36969 197 aaPredicted RBP6.02□□□□□ -1.45
LSM2-213ENST00000491421 PPP1R1AQ13522 171 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 TOR2AQ5JU69 321 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 SPANXN2Q5MJ10 180 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 SIGLEC15Q6ZMC9 328 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 CCDC190Q86UF4 302 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 LRTM2Q8N967 370 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 RAB40CQ96S21 281 aa6.02□□□□□ -1.45
LSM2-213ENST00000491421 PAIP2BQ9ULR5 123 aaKnown RBP6.02□□□□□ -1.45
LSM2-213ENST00000491421 IGKV1D-37A0A075B6S9 117 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 IGHV4-28A0A0C4DH34 117 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 MED6O75586 246 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 SFT2D2O95562 160 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 SLC25A6P12236 298 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 MIFP14174 115 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 INPP1P49441 399 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 LYZP61626 148 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 RAB11AP62491 216 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 RPP30P78346 268 aaKnown RBP6.01□□□□□ -1.45
LSM2-213ENST00000491421 ZNF90Q03938 601 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 OR8G2PQ6IF36 304 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 CENPSQ8N2Z9 138 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 Q8NAQ8 132 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 CIB3Q96Q77 187 aaPredicted RBP6.01□□□□□ -1.45
LSM2-213ENST00000491421 RBM38Q9H0Z9 239 aaKnown RBP6.01□□□□□ -1.45
LSM2-213ENST00000491421 SEPSECSQ9HD40 501 aaKnown RBP6.01□□□□□ -1.45
LSM2-213ENST00000491421 CLEC5AQ9NY25 188 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 TMED3Q9Y3Q3 217 aa6.01□□□□□ -1.45
LSM2-213ENST00000491421 SNRPGP15A8MWD9 76 aa6□□□□□ -1.45
LSM2-213ENST00000491421 ZNF701M0R085 212 aaPredicted RBP6□□□□□ -1.45
LSM2-213ENST00000491421 SYNGR2O43760 224 aa6□□□□□ -1.45
LSM2-213ENST00000491421 HOXB5P09067 269 aa6□□□□□ -1.45
LSM2-213ENST00000491421 NUTF2P61970 127 aaKnown RBP6□□□□□ -1.45
LSM2-213ENST00000491421 OR2F1Q13607 317 aa6□□□□□ -1.45
LSM2-213ENST00000491421 TRIQKQ629K1 86 aa6□□□□□ -1.45
LSM2-213ENST00000491421 WDR73Q6P4I2 378 aa6□□□□□ -1.45
LSM2-213ENST00000491421 PPP1R14BQ96C90 147 aa6□□□□□ -1.45
LSM2-213ENST00000491421 TRGV9Q99603 122 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms