RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LYRM1O43325 122 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 TOMM40O96008 361 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 IGKV1-17P01599 117 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 SPP1P10451 314 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 OR51G1Q8NGK1 321 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
PDLIM2-217ENST00000491330 A6NHS1 94 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 BTCP35070 178 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 PPP1R14BQ96C90 147 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 WDR12Q9GZL7 423 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 PTTG2Q9NZH5 202 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 FBXL17Q9UF56 701 aa12.21□□□□□ -0.45
PDLIM2-217ENST00000491330 SNRPGP15A8MWD9 76 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 K7EQG2 157 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 SYNGR2O43760 224 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 C4orf46Q504U0 113 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 GGNBP1Q5YKI7 109 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 C1QTNF4Q9BXJ3 329 aa12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 MRPL36Q9P0J6 103 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-217ENST00000491330 HOXB5P09067 269 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 ID1P41134 155 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 ZNF124Q15973 351 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 SAMD13Q5VXD3 122 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 MZT2BQ6NZ67 158 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 C16orf54Q6UWD8 224 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 LILRB2Q8N423 598 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 C20orf85Q9H1P6 137 aa12.19□□□□□ -0.46
PDLIM2-217ENST00000491330 WRBO00258 174 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 PLA2G10O15496 165 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 TCRBP04435 133 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 PSG1P11464 419 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 ID3Q02535 119 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 SIGLEC15Q6ZMC9 328 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 RNF125Q96EQ8 232 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 NRN1Q9NPD7 142 aa12.18□□□□□ -0.46
PDLIM2-217ENST00000491330 LINC00854A0A1B0GVQ3 168 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 LY6G6CO95867 125 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 ZNF846Q147U1 533 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 PSMG4Q5JS54 123 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 ACTL10Q5JWF8 245 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 U3KQE9 123 aa12.17□□□□□ -0.46
PDLIM2-217ENST00000491330 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
PDLIM2-217ENST00000491330 FAM240BA0A1B0GVZ2 78 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 BUB3O43684 328 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 MIFP14174 115 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 TAS2R30P59541 319 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 ASAH1Q13510 395 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 GAMTQ14353 236 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 OR4D5Q8NGN0 318 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 DCANP1Q8TF63 244 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
PDLIM2-217ENST00000491330 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 FNDC10F2Z333 226 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 IAPPP10997 89 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 TCTAP57738 103 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 LYZP61626 148 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 TRGV9Q99603 122 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 NUDT15Q9NV35 164 aa12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 HUWE1Q7Z6Z7 4374 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-217ENST00000491330 ADAP1O75689 374 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 MEOX2P50222 304 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 SPANXN5Q5MJ07 72 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 FAM24BQ8N5W8 94 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 THAP8Q8NA92 274 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 BPIFCQ8NFQ6 507 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 ZNF431Q8TF32 576 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
PDLIM2-217ENST00000491330 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 TSC22D2O75157 780 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 UPK1BO75841 260 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 H2AFB2P0C5Z0 115 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 GALR1P47211 349 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms