RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 RBKSQ9H477 322 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 NRN1Q9NPD7 142 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 MCUBQ9NWR8 336 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 SCP2D1Q9UJQ7 156 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 TBC1D24Q9ULP9 559 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 CELA1Q9UNI1 258 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 KCNIP3Q9Y2W7 256 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 CCR6P51684 374 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 SNRPD3P62318 126 aaKnown RBP11.35□□□□□ -0.59
SMPD4-220ENST00000491319 LGI3Q8N145 548 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 CACFD1Q9UGQ2 172 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 U3KQ87 197 aa11.35□□□□□ -0.59
SMPD4-220ENST00000491319 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
SMPD4-220ENST00000491319 PBDC1Q9BVG4 233 aa11.34□□□□□ -0.59
SMPD4-220ENST00000491319 SLIRPQ9GZT3 109 aaKnown RBP11.34□□□□□ -0.59
SMPD4-220ENST00000491319 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
SMPD4-220ENST00000491319 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 H3BMM0 161 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 TMBIM6P55061 237 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 DEFB1P60022 68 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 ZNF767PQ75MW2 155 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
SMPD4-220ENST00000491319 RSL24D1Q9UHA3 163 aaKnown RBP11.33□□□□□ -0.6
SMPD4-220ENST00000491319 IGHV4-4A0A075B6R2 117 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 IGKV1D-37A0A075B6S9 117 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 ZFP92A6NM28 416 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 ANXA3P12429 323 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 TNFSF8P32971 234 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 ZNF90Q03938 601 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-220ENST00000491319 GAMTQ14353 236 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 OR1S1Q8NH92 325 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 SEPSECSQ9HD40 501 aaKnown RBP11.32□□□□□ -0.6
SMPD4-220ENST00000491319 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
SMPD4-220ENST00000491319 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 H3BMQ9 156 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 LYZP61626 148 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
SMPD4-220ENST00000491319 SRPXP78539 464 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 C12orf74Q32Q52 190 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
SMPD4-220ENST00000491319 WDR12Q9GZL7 423 aaKnown RBP11.31□□□□□ -0.6
SMPD4-220ENST00000491319 IAPPP10997 89 aa11.3□□□□□ -0.6
SMPD4-220ENST00000491319 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-220ENST00000491319 NKX2-1P43699 371 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-220ENST00000491319 TMED4Q7Z7H5 227 aa11.3□□□□□ -0.6
SMPD4-220ENST00000491319 CENPSQ8N2Z9 138 aa11.3□□□□□ -0.6
SMPD4-220ENST00000491319 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
SMPD4-220ENST00000491319 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
SMPD4-220ENST00000491319 NOL3O60936 208 aaKnown RBP11.29□□□□□ -0.6
SMPD4-220ENST00000491319 PITX3O75364 302 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 GPX4P36969 197 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-220ENST00000491319 FXYD7P58549 80 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 OR2F1Q13607 317 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 RNF126Q9BV68 326 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
SMPD4-220ENST00000491319 DEFB131BA0A096LNP1 70 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 DUXBA0A1W2PPF3 345 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 SOCS3O14543 225 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 AMBPP02760 352 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 FAUP35544 74 aaKnown RBP11.28□□□□□ -0.6
SMPD4-220ENST00000491319 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-220ENST00000491319 TMEM128Q5BJH2 165 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-220ENST00000491319 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-220ENST00000491319 PFDN2Q9UHV9 154 aa11.28□□□□□ -0.6
SMPD4-220ENST00000491319 PAIP2BQ9ULR5 123 aaKnown RBP11.28□□□□□ -0.6
SMPD4-220ENST00000491319 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 VAMP1P23763 118 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 PSMB3P49720 205 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 TRGV9Q99603 122 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 HECTD4Q9Y4D8 3996 aa11.27□□□□□ -0.61
SMPD4-220ENST00000491319 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-220ENST00000491319 FABP1P07148 127 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ID1P41134 155 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 RAB11AP62491 216 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF79Q15937 498 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
SMPD4-220ENST00000491319 OR4B1Q8NGF8 309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms