RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PLECQ15149 4684 aaKnown RBP22.99■■□□□ 1.27
LDB1-204ENST00000490751 ZFP92A6NM28 416 aa22.98■■□□□ 1.27
LDB1-204ENST00000490751 AP2S1P53680 142 aaPredicted RBP22.98■■□□□ 1.27
LDB1-204ENST00000490751 RAB11AP62491 216 aa22.98■■□□□ 1.27
LDB1-204ENST00000490751 TMEM217Q8N7C4 229 aa22.98■■□□□ 1.27
LDB1-204ENST00000490751 RNF125Q96EQ8 232 aa22.98■■□□□ 1.27
LDB1-204ENST00000490751 RARRES2Q99969 163 aa22.98■■□□□ 1.27
LDB1-204ENST00000490751 PAIP2BQ9ULR5 123 aaKnown RBP22.98■■□□□ 1.27
LDB1-204ENST00000490751 BUB3O43684 328 aa22.97■■□□□ 1.27
LDB1-204ENST00000490751 NDUFB6O95139 128 aa22.97■■□□□ 1.27
LDB1-204ENST00000490751 ATF4P18848 351 aaPredicted RBP22.97■■□□□ 1.27
LDB1-204ENST00000490751 GGNBP1Q5YKI7 109 aa22.97■■□□□ 1.27
LDB1-204ENST00000490751 SDHCQ99643 169 aaPredicted RBP22.97■■□□□ 1.27
LDB1-204ENST00000490751 MAGT1Q9H0U3 335 aa22.97■■□□□ 1.27
LDB1-204ENST00000490751 AGRNO00468 2067 aa22.97■■□□□ 1.27
LDB1-204ENST00000490751 IGKV1D-37A0A075B6S9 117 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 LINC00854A0A1B0GVQ3 168 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 ZNF90Q03938 601 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 CIB3Q96Q77 187 aaPredicted RBP22.96■■□□□ 1.27
LDB1-204ENST00000490751 PBDC1Q9BVG4 233 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 FLVCR2Q9UPI3 526 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 ALMS1Q8TCU4 4167 aa22.96■■□□□ 1.27
LDB1-204ENST00000490751 C9orf170A2RU37 121 aa22.95■■□□□ 1.26
LDB1-204ENST00000490751 KNCNA6PVL3 124 aa22.95■■□□□ 1.26
LDB1-204ENST00000490751 SYNGR2O43760 224 aa22.95■■□□□ 1.26
LDB1-204ENST00000490751 TRPT1Q86TN4 253 aaKnown RBP22.95■■□□□ 1.26
LDB1-204ENST00000490751 OR11H2Q8NH07 326 aa22.95■■□□□ 1.26
LDB1-204ENST00000490751 WRBO00258 174 aa22.94■■□□□ 1.26
LDB1-204ENST00000490751 SIGLEC15Q6ZMC9 328 aa22.94■■□□□ 1.26
LDB1-204ENST00000490751 NUPR2A6NF83 97 aa22.93■■□□□ 1.26
LDB1-204ENST00000490751 ADAP1O75689 374 aa22.93■■□□□ 1.26
LDB1-204ENST00000490751 PSMG4Q5JS54 123 aa22.93■■□□□ 1.26
LDB1-204ENST00000490751 HYDINQ4G0P3 5121 aa22.92■■□□□ 1.26
LDB1-204ENST00000490751 FABP1P07148 127 aa22.92■■□□□ 1.26
LDB1-204ENST00000490751 RPP30P78346 268 aaKnown RBP22.92■■□□□ 1.26
LDB1-204ENST00000490751 OR8G2PQ6IF36 304 aa22.92■■□□□ 1.26
LDB1-204ENST00000490751 NRN1Q9NPD7 142 aa22.92■■□□□ 1.26
LDB1-204ENST00000490751 CENPXA8MT69 81 aa22.91■■□□□ 1.26
LDB1-204ENST00000490751 NUP62P37198 522 aaPredicted RBP22.91■■□□□ 1.26
LDB1-204ENST00000490751 ACTL10Q5JWF8 245 aa22.91■■□□□ 1.26
LDB1-204ENST00000490751 IL7P13232 177 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 BTCP35070 178 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 LYZP61626 148 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 OR2F1Q13607 317 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 COQ8AQ8NI60 647 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 TRGV9Q99603 122 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 C7orf50Q9BRJ6 194 aaKnown RBP22.9■■□□□ 1.26
LDB1-204ENST00000490751 PFDN2Q9UHV9 154 aa22.9■■□□□ 1.26
LDB1-204ENST00000490751 GIG44P09565 113 aaPredicted RBP22.89■■□□□ 1.25
LDB1-204ENST00000490751 OR4E1P0C645 316 aa22.89■■□□□ 1.25
LDB1-204ENST00000490751 SPP1P10451 314 aa22.89■■□□□ 1.25
LDB1-204ENST00000490751 SPANXN5Q5MJ07 72 aa22.89■■□□□ 1.25
LDB1-204ENST00000490751 MORN3Q6PF18 240 aaPredicted RBP22.89■■□□□ 1.25
LDB1-204ENST00000490751 CEMP1Q6PRD7 247 aaPredicted RBP22.89■■□□□ 1.25
LDB1-204ENST00000490751 C11orf68Q9H3H3 251 aaKnown RBP22.89■■□□□ 1.25
LDB1-204ENST00000490751 IGKV1OR2-108A0A075B7D4 117 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 SNRPGP15A8MWD9 76 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 PRSS46E5RG02 174 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 H3BP45 60 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 C4BPBP20851 252 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 SNRPD3P62318 126 aaKnown RBP22.88■■□□□ 1.25
LDB1-204ENST00000490751 THAP8Q8NA92 274 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 RAB40CQ96S21 281 aa22.88■■□□□ 1.25
LDB1-204ENST00000490751 ANXA7P20073 488 aaKnown RBP22.87■■□□□ 1.25
LDB1-204ENST00000490751 TMEM41BQ5BJD5 291 aa22.87■■□□□ 1.25
LDB1-204ENST00000490751 SEPSECSQ9HD40 501 aaKnown RBP22.87■■□□□ 1.25
LDB1-204ENST00000490751 NDUFA13Q9P0J0 144 aa22.87■■□□□ 1.25
LDB1-204ENST00000490751 C4orf46Q504U0 113 aa22.86■■□□□ 1.25
LDB1-204ENST00000490751 STRAPQ9Y3F4 350 aaKnown RBP22.86■■□□□ 1.25
LDB1-204ENST00000490751 IFNA21P01568 189 aa22.85■■□□□ 1.25
LDB1-204ENST00000490751 POLR2GP62487 172 aaKnown RBP eCLIP22.85■■□□□ 1.25
LDB1-204ENST00000490751 ID3Q02535 119 aa22.85■■□□□ 1.25
LDB1-204ENST00000490751 DEFB4AO15263 64 aa22.84■■□□□ 1.25
LDB1-204ENST00000490751 NKX2-1P43699 371 aaPredicted RBP22.84■■□□□ 1.25
LDB1-204ENST00000490751 OR4D5Q8NGN0 318 aa22.84■■□□□ 1.25
LDB1-204ENST00000490751 PPP1R14BQ96C90 147 aa22.84■■□□□ 1.25
LDB1-204ENST00000490751 KLK5Q9Y337 293 aaPredicted RBP22.84■■□□□ 1.25
LDB1-204ENST00000490751 C11orf45Q8TAV5 145 aa22.83■■□□□ 1.25
LDB1-204ENST00000490751 PHLDA1Q8WV24 401 aaPredicted RBP22.83■■□□□ 1.25
LDB1-204ENST00000490751 LINC00476Q8WZB0 136 aa22.83■■□□□ 1.25
LDB1-204ENST00000490751 FBXL17Q9UF56 701 aa22.83■■□□□ 1.25
LDB1-204ENST00000490751 NANOS2P60321 138 aaKnown RBP22.82■■□□□ 1.24
LDB1-204ENST00000490751 C1orf194Q5T5A4 169 aa22.82■■□□□ 1.24
LDB1-204ENST00000490751 ACOT7LQ6ZUV0 252 aa22.82■■□□□ 1.24
LDB1-204ENST00000490751 AKR1C1Q04828 323 aa22.81■■□□□ 1.24
LDB1-204ENST00000490751 CLEC5AQ9NY25 188 aa22.81■■□□□ 1.24
LDB1-204ENST00000490751 PSENENQ9NZ42 101 aa22.81■■□□□ 1.24
LDB1-204ENST00000490751 PLA2G10O15496 165 aa22.8■■□□□ 1.24
LDB1-204ENST00000490751 SSSCA1O60232 199 aa22.8■■□□□ 1.24
LDB1-204ENST00000490751 CFDP00746 253 aaPredicted RBP22.8■■□□□ 1.24
LDB1-204ENST00000490751 CNPY1Q3B7I2 92 aa22.8■■□□□ 1.24
LDB1-204ENST00000490751 Q8NAQ8 132 aa22.8■■□□□ 1.24
LDB1-204ENST00000490751 WDR12Q9GZL7 423 aaKnown RBP22.8■■□□□ 1.24
LDB1-204ENST00000490751 MFFQ9GZY8 342 aa22.8■■□□□ 1.24
LDB1-204ENST00000490751 OR8I2Q8N0Y5 310 aa22.79■■□□□ 1.24
LDB1-204ENST00000490751 C20orf85Q9H1P6 137 aa22.79■■□□□ 1.24
LDB1-204ENST00000490751 H3BMM0 161 aa22.78■■□□□ 1.24
LDB1-204ENST00000490751 ZNF705EA8MWA4 302 aaPredicted RBP22.77■■□□□ 1.24
LDB1-204ENST00000490751 LYRM1O43325 122 aa22.77■■□□□ 1.24
LDB1-204ENST00000490751 LY6G6CO95867 125 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms