RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 LYZP61626 148 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 KRTAP21-3Q3LHN1 58 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 LGALSLQ3ZCW2 172 aaPredicted RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 FAM106AQ4KMX7 169 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 UNQ9165/PRO28630Q6UXU0 137 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 C1QL4Q86Z23 238 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF709Q8N972 641 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 HSD17B11Q8NBQ5 300 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 BPIFCQ8NFQ6 507 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 Q8WTZ3 238 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 PBDC1Q9BVG4 233 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 LSM4Q9Y4Z0 139 aaKnown RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 C17orf112F2Z3M2 114 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 HNRNPCP07910 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAIP-209ENST00000488860 LINC00869P0C866 280 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 OPCMLQ14982 345 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 TMEM182Q6ZP80 229 aaPredicted RBP9.43□□□□□ -0.9
TRAIP-209ENST00000488860 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 TMEM190Q8WZ59 177 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF471Q9BX82 626 aaPredicted RBP9.43□□□□□ -0.9
TRAIP-209ENST00000488860 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 DOK5Q9P104 306 aa9.43□□□□□ -0.9
TRAIP-209ENST00000488860 OVOL1O14753 267 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 SELENOTP62341 195 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
TRAIP-209ENST00000488860 REC114Q7Z4M0 266 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 LINC00482Q8N8I6 264 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 GINS3Q9BRX5 216 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 PARD6GQ9BYG4 376 aaPredicted RBP9.42□□□□□ -0.9
TRAIP-209ENST00000488860 KCNIP2Q9NS61 270 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 UFC1Q9Y3C8 167 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
TRAIP-209ENST00000488860 JTBO76095 146 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 ORM2P19652 201 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 CD33P20138 364 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 EDN2P20800 178 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 ATP6V0CP27449 155 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
TRAIP-209ENST00000488860 B2MP61769 119 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
TRAIP-209ENST00000488860 TM4SF20Q53R12 229 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 OR9G4Q8NGQ1 327 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 SLC45A2Q9UMX9 530 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
TRAIP-209ENST00000488860 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 LGALS9O00182 355 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 COX7A2P2O60397 106 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
TRAIP-209ENST00000488860 OR5G3P0C626 314 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 C4BPBP20851 252 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 FFAR4Q5NUL3 377 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 LAMTOR1Q6IAA8 161 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 Q6ZRG5 221 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 PPP1R14BQ96C90 147 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 METTL26Q96S19 204 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 DAZ1Q9NQZ3 744 aaKnown RBP9.4□□□□□ -0.9
TRAIP-209ENST00000488860 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
TRAIP-209ENST00000488860 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 WI2-2373I1.2A0A1W2PRP0 233 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 TMEM213A2RRL7 107 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 A8MWP6 167 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
TRAIP-209ENST00000488860 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
TRAIP-209ENST00000488860 PRR20EP86478 221 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 PRR20CP86479 221 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 PRR20DP86480 221 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 PRR20BP86481 221 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 PRR20AP86496 221 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 NARS2Q96I59 477 aaKnown RBP9.39□□□□□ -0.91
TRAIP-209ENST00000488860 SLC25A32Q9H2D1 315 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 SELENOKQ9Y6D0 94 aa9.39□□□□□ -0.91
TRAIP-209ENST00000488860 CMYA5Q8N3K9 4069 aa9.38□□□□□ -0.91
TRAIP-209ENST00000488860 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
TRAIP-209ENST00000488860 HYPMO75409 117 aa9.38□□□□□ -0.91
TRAIP-209ENST00000488860 SAP30O75446 220 aa9.38□□□□□ -0.91
TRAIP-209ENST00000488860 NPPCP23582 126 aa9.38□□□□□ -0.91
TRAIP-209ENST00000488860 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms